Experiment ID: 415

Field Description
namethe structure and function of the global citrus rhizosphere microbiome
sraprjna362455
datamd599728ab286279cf49c3a079c55b28a3d
mapmd52cca0c2ae043b245251493112950df64

Annotations for experiment:

term enrichment score
TermScore
orchard0.666667
citrus0.500000
cultivated environment0.222222
reunion island0.181818
south africa0.125000
LOWER IN mediterranean0.100000
LOWER IN semi-arid0.100000
mediterranean0.100000
subtropical0.095238
semi-arid0.095238
LOWER IN subtropical0.095238
italy0.080000
brazil0.074074
kingdom of spain0.071429
australia0.066667
rhizosphere0.055556
soil0.029851
china0.014706
united states of america0.008511
Fraction of dbbact annotations with this term covered by the query
TermScore
orchard0.500000
reunion island0.500000
LOWER IN mediterranean0.500000
LOWER IN semi-arid0.500000
mediterranean0.500000
citrus0.333333
subtropical0.333333
semi-arid0.333333
LOWER IN subtropical0.333333
south africa0.142857
cultivated environment0.125000
italy0.062500
brazil0.055556
kingdom of spain0.052632
australia0.047619
rhizosphere0.028571
soil0.015152
china0.007874
united states of america0.004425
Fraction of annotations for the query sequences containing the term
TermScore
rhizosphere1.000000
soil1.000000
citrus1.000000
orchard1.000000
cultivated environment1.000000
italy0.111111
kingdom of spain0.111111
brazil0.111111
china0.111111
australia0.111111
reunion island0.111111
south africa0.111111
united states of america0.111111
subtropical0.055556
LOWER IN mediterranean0.055556
LOWER IN semi-arid0.055556
mediterranean0.055556
semi-arid0.055556
LOWER IN subtropical0.055556
Exp. ID User ID Description Date Region Flag Sequences
415amnondominant rhizosphere, soil, citrus, australia, orchard, cultivated environment2018-11-27v4No1 / -4
415amnondominant rhizosphere, soil, citrus, orchard, italy, cultivated environment2018-11-27v4No1 / -4
415amnondominant rhizosphere, soil, citrus, orchard, reunion island, cultivated environment2018-11-27v4No1 / -2
415amnondominant rhizosphere, soil, citrus, orchard, united states of america, cultivated environment2018-11-27v4No1 / -2
415amnondominant rhizosphere, soil, citrus, orchard, china, cultivated environment2018-11-27v4No1 / -1
415amnondominant rhizosphere, soil, citrus, orchard, brazil, cultivated environment2018-11-27v4No1 / 0
415amnondominant rhizosphere, soil, citrus, orchard, south africa, cultivated environment2018-11-27v4No1 / 0
415amnondominant rhizosphere, soil, citrus, orchard, kingdom of spain, cultivated environment2018-11-27v4No1 / 1
415amnonlower in citrus from humid subtropical compared to mediterranean and semi-arid climate ( high in mediterranean semi-arid compared to subtropical in rhizosphere soil citrus orchard cultivated environment )2018-11-27v4No1 / 256
415amnonhigher in citrus from humid subtropical compared to mediterranean and semi-arid climate ( high in subtropical compared to mediterranean semi-arid in rhizosphere soil citrus orchard cultivated environment )2018-11-27v4No1 / 450
415amnoncommon rhizosphere, soil, citrus, orchard, united states of america, cultivated environment2018-11-27v4No1 / 486
415amnoncommon rhizosphere, soil, citrus, orchard, south africa, cultivated environment2018-11-27v4No1 / 592
415amnoncommon rhizosphere, soil, citrus, orchard, reunion island, cultivated environment2018-11-27v4No1 / 713
415amnoncommon rhizosphere, soil, citrus, australia, orchard, cultivated environment2018-11-27v4No1 / 735
415amnoncommon rhizosphere, soil, citrus, orchard, china, cultivated environment2018-11-27v4No1 / 822
415amnoncommon rhizosphere, soil, citrus, orchard, brazil, cultivated environment2018-11-27v4No1 / 1083
415amnoncommon rhizosphere, soil, citrus, orchard, kingdom of spain, cultivated environment2018-11-27v4No1 / 1091
415amnoncommon rhizosphere, soil, citrus, orchard, italy, cultivated environment2018-11-27v4No1 / 1271

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