Experiment ID: 415

Field Description
namethe structure and function of the global citrus rhizosphere microbiome
sraprjna362455
datamd599728ab286279cf49c3a079c55b28a3d
mapmd52cca0c2ae043b245251493112950df64

Annotations for experiment:

term enrichment score
TermScore
orchard0.666667
citrus0.500000
cultivated environment0.222222
reunion island0.181818
south africa0.125000
LOWER IN mediterranean0.100000
LOWER IN semi-arid0.100000
mediterranean0.100000
italy0.095238
subtropical0.095238
semi-arid0.095238
LOWER IN subtropical0.095238
kingdom of spain0.090909
brazil0.083333
australia0.071429
rhizosphere0.058824
soil0.031250
china0.016807
united states of america0.009174
Fraction of dbbact annotations with this term covered by the query
TermScore
orchard0.500000
reunion island0.500000
LOWER IN mediterranean0.500000
LOWER IN semi-arid0.500000
mediterranean0.500000
citrus0.333333
subtropical0.333333
semi-arid0.333333
LOWER IN subtropical0.333333
south africa0.142857
cultivated environment0.125000
italy0.083333
kingdom of spain0.076923
brazil0.066667
australia0.052632
rhizosphere0.030303
soil0.015873
china0.009091
united states of america0.004785
Fraction of annotations for the query sequences containing the term
TermScore
rhizosphere1.000000
soil1.000000
citrus1.000000
orchard1.000000
cultivated environment1.000000
italy0.111111
kingdom of spain0.111111
brazil0.111111
china0.111111
australia0.111111
reunion island0.111111
south africa0.111111
united states of america0.111111
subtropical0.055556
LOWER IN mediterranean0.055556
LOWER IN semi-arid0.055556
mediterranean0.055556
semi-arid0.055556
LOWER IN subtropical0.055556
Exp. ID User ID Description Date Region Flag Sequences
415amnondominant rhizosphere, soil, citrus, australia, orchard, cultivated environment2018-11-27v4No1 / 4
415amnondominant rhizosphere, soil, citrus, orchard, italy, cultivated environment2018-11-27v4No1 / 4
415amnondominant rhizosphere, soil, citrus, orchard, reunion island, cultivated environment2018-11-27v4No1 / 6
415amnondominant rhizosphere, soil, citrus, orchard, united states of america, cultivated environment2018-11-27v4No1 / 6
415amnondominant rhizosphere, soil, citrus, orchard, china, cultivated environment2018-11-27v4No1 / 7
415amnondominant rhizosphere, soil, citrus, orchard, brazil, cultivated environment2018-11-27v4No1 / 8
415amnondominant rhizosphere, soil, citrus, orchard, south africa, cultivated environment2018-11-27v4No1 / 8
415amnondominant rhizosphere, soil, citrus, orchard, kingdom of spain, cultivated environment2018-11-27v4No1 / 9
415amnonlower in citrus from humid subtropical compared to mediterranean and semi-arid climate ( high in mediterranean semi-arid compared to subtropical in rhizosphere soil citrus orchard cultivated environment )2018-11-27v4No1 / 264
415amnonhigher in citrus from humid subtropical compared to mediterranean and semi-arid climate ( high in subtropical compared to mediterranean semi-arid in rhizosphere soil citrus orchard cultivated environment )2018-11-27v4No1 / 458
415amnoncommon rhizosphere, soil, citrus, orchard, united states of america, cultivated environment2018-11-27v4No1 / 494
415amnoncommon rhizosphere, soil, citrus, orchard, south africa, cultivated environment2018-11-27v4No1 / 600
415amnoncommon rhizosphere, soil, citrus, orchard, reunion island, cultivated environment2018-11-27v4No1 / 721
415amnoncommon rhizosphere, soil, citrus, australia, orchard, cultivated environment2018-11-27v4No1 / 743
415amnoncommon rhizosphere, soil, citrus, orchard, china, cultivated environment2018-11-27v4No1 / 830
415amnoncommon rhizosphere, soil, citrus, orchard, brazil, cultivated environment2018-11-27v4No1 / 1091
415amnoncommon rhizosphere, soil, citrus, orchard, kingdom of spain, cultivated environment2018-11-27v4No1 / 1099
415amnoncommon rhizosphere, soil, citrus, orchard, italy, cultivated environment2018-11-27v4No1 / 1279

Problems / suggestions? Please email info AT dbbact DOT org