Experiment ID: 415

Field Description
namethe structure and function of the global citrus rhizosphere microbiome
sraprjna362455
datamd599728ab286279cf49c3a079c55b28a3d
mapmd52cca0c2ae043b245251493112950df64

Annotations for experiment:

term enrichment score
TermScore
orchard0.400000
citrus0.333333
cultivated environment0.222222
reunion island0.181818
LOWER IN mediterranean0.100000
mediterranean0.100000
subtropical0.095238
LOWER IN semi-arid0.095238
semi-arid0.095238
LOWER IN subtropical0.095238
south africa0.083333
brazil0.071429
kingdom of spain0.066667
italy0.064516
australia0.055556
rhizosphere0.041667
soil0.019608
china0.010309
united states of america0.007463
Fraction of dbbact annotations with this term covered by the query
TermScore
reunion island0.500000
LOWER IN mediterranean0.500000
mediterranean0.500000
subtropical0.333333
LOWER IN semi-arid0.333333
semi-arid0.333333
LOWER IN subtropical0.333333
orchard0.250000
citrus0.200000
cultivated environment0.125000
south africa0.066667
brazil0.052632
kingdom of spain0.047619
italy0.045455
australia0.037037
rhizosphere0.021277
soil0.009901
china0.005405
united states of america0.003861
Fraction of annotations for the query sequences containing the term
TermScore
rhizosphere1.000000
soil1.000000
citrus1.000000
orchard1.000000
cultivated environment1.000000
italy0.111111
kingdom of spain0.111111
brazil0.111111
china0.111111
australia0.111111
reunion island0.111111
south africa0.111111
united states of america0.111111
subtropical0.055556
LOWER IN mediterranean0.055556
LOWER IN semi-arid0.055556
mediterranean0.055556
semi-arid0.055556
LOWER IN subtropical0.055556
Number of experiments associating the term to the sequence
TermScore
rhizosphere1.000000
soil1.000000
citrus1.000000
orchard1.000000
italy1.000000
cultivated environment1.000000
kingdom of spain1.000000
brazil1.000000
china1.000000
australia1.000000
reunion island1.000000
south africa1.000000
united states of america1.000000
subtropical1.000000
LOWER IN mediterranean1.000000
LOWER IN semi-arid1.000000
mediterranean1.000000
semi-arid1.000000
LOWER IN subtropical1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
415amnondominant rhizosphere, soil, citrus, australia, orchard, cultivated environment2018-11-27v41 / 4approvedNo
415amnondominant rhizosphere, soil, citrus, orchard, italy, cultivated environment2018-11-27v41 / 4approvedNo
415amnondominant rhizosphere, soil, citrus, orchard, reunion island, cultivated environment2018-11-27v41 / 6approvedNo
415amnondominant rhizosphere, soil, citrus, orchard, united states of america, cultivated environment2018-11-27v41 / 6approvedNo
415amnondominant rhizosphere, soil, citrus, orchard, china, cultivated environment2018-11-27v41 / 7approvedNo
415amnondominant rhizosphere, soil, citrus, orchard, brazil, cultivated environment2018-11-27v41 / 8approvedNo
415amnondominant rhizosphere, soil, citrus, orchard, south africa, cultivated environment2018-11-27v41 / 8approvedNo
415amnondominant rhizosphere, soil, citrus, orchard, kingdom of spain, cultivated environment2018-11-27v41 / 9approvedNo
415amnonlower in citrus from humid subtropical compared to mediterranean and semi-arid climate ( high in mediterranean semi-arid compared to subtropical in rhizosphere soil citrus orchard cultivated environment )2018-11-27v41 / 264approvedNo
415amnonhigher in citrus from humid subtropical compared to mediterranean and semi-arid climate ( high in subtropical compared to mediterranean semi-arid in rhizosphere soil citrus orchard cultivated environment )2018-11-27v41 / 458approvedNo
415amnoncommon rhizosphere, soil, citrus, orchard, united states of america, cultivated environment2018-11-27v41 / 494approvedNo
415amnoncommon rhizosphere, soil, citrus, orchard, south africa, cultivated environment2018-11-27v41 / 600approvedNo
415amnoncommon rhizosphere, soil, citrus, orchard, reunion island, cultivated environment2018-11-27v41 / 721approvedNo
415amnoncommon rhizosphere, soil, citrus, australia, orchard, cultivated environment2018-11-27v41 / 743approvedNo
415amnoncommon rhizosphere, soil, citrus, orchard, china, cultivated environment2018-11-27v41 / 830approvedNo
415amnoncommon rhizosphere, soil, citrus, orchard, brazil, cultivated environment2018-11-27v41 / 1091approvedNo
415amnoncommon rhizosphere, soil, citrus, orchard, kingdom of spain, cultivated environment2018-11-27v41 / 1099approvedNo
415amnoncommon rhizosphere, soil, citrus, orchard, italy, cultivated environment2018-11-27v41 / 1279approvedNo

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