Experiment ID: 415

Field Description
namethe structure and function of the global citrus rhizosphere microbiome
sraprjna362455
datamd599728ab286279cf49c3a079c55b28a3d
mapmd52cca0c2ae043b245251493112950df64

Annotations for experiment:

term enrichment score
TermScore
orchard0.500000
citrus0.400000
cultivated environment0.222222
reunion island0.181818
LOWER IN mediterranean0.100000
mediterranean0.100000
subtropical0.095238
LOWER IN semi-arid0.095238
semi-arid0.095238
LOWER IN subtropical0.095238
south africa0.086957
brazil0.071429
italy0.068966
kingdom of spain0.066667
australia0.062500
rhizosphere0.044444
soil0.020000
china0.011050
united states of america0.007812
Fraction of dbbact annotations with this term covered by the query
TermScore
reunion island0.500000
LOWER IN mediterranean0.500000
mediterranean0.500000
orchard0.333333
subtropical0.333333
LOWER IN semi-arid0.333333
semi-arid0.333333
LOWER IN subtropical0.333333
citrus0.250000
cultivated environment0.125000
south africa0.071429
brazil0.052632
italy0.050000
kingdom of spain0.047619
australia0.043478
rhizosphere0.022727
soil0.010101
china0.005814
united states of america0.004049
Fraction of annotations for the query sequences containing the term
TermScore
orchard1.000000
soil1.000000
rhizosphere1.000000
citrus1.000000
cultivated environment1.000000
italy0.111111
kingdom of spain0.111111
brazil0.111111
china0.111111
australia0.111111
reunion island0.111111
south africa0.111111
united states of america0.111111
subtropical0.055556
LOWER IN mediterranean0.055556
LOWER IN semi-arid0.055556
mediterranean0.055556
semi-arid0.055556
LOWER IN subtropical0.055556
Exp. ID User ID Description Date Region Flag Sequences
415amnondominant orchard, soil, rhizosphere, italy, citrus, cultivated environment2018-11-27v4No1 / 4
415amnondominant orchard, soil, rhizosphere, australia, citrus, cultivated environment2018-11-27v4No1 / 4
415amnondominant united states of america, orchard, soil, rhizosphere, citrus, cultivated environment2018-11-27v4No1 / 6
415amnondominant orchard, soil, rhizosphere, reunion island, citrus, cultivated environment2018-11-27v4No1 / 6
415amnondominant orchard, soil, rhizosphere, citrus, cultivated environment, china2018-11-27v4No1 / 7
415amnondominant orchard, soil, rhizosphere, south africa, citrus, cultivated environment2018-11-27v4No1 / 8
415amnondominant orchard, soil, rhizosphere, brazil, citrus, cultivated environment2018-11-27v4No1 / 8
415amnondominant orchard, soil, rhizosphere, kingdom of spain, citrus, cultivated environment2018-11-27v4No1 / 9
415amnonlower in citrus from humid subtropical compared to mediterranean and semi-arid climate ( high in mediterranean semi-arid compared to subtropical in orchard soil rhizosphere citrus cultivated environment )2018-11-27v4No1 / 264
415amnonhigher in citrus from humid subtropical compared to mediterranean and semi-arid climate ( high in subtropical compared to mediterranean semi-arid in orchard soil rhizosphere citrus cultivated environment )2018-11-27v4No1 / 458
415amnoncommon united states of america, orchard, soil, rhizosphere, citrus, cultivated environment2018-11-27v4No1 / 494
415amnoncommon orchard, soil, rhizosphere, south africa, citrus, cultivated environment2018-11-27v4No1 / 600
415amnoncommon orchard, soil, rhizosphere, reunion island, citrus, cultivated environment2018-11-27v4No1 / 721
415amnoncommon orchard, soil, rhizosphere, australia, citrus, cultivated environment2018-11-27v4No1 / 743
415amnoncommon orchard, soil, rhizosphere, citrus, cultivated environment, china2018-11-27v4No1 / 830
415amnoncommon orchard, soil, rhizosphere, brazil, citrus, cultivated environment2018-11-27v4No1 / 1091
415amnoncommon orchard, soil, rhizosphere, kingdom of spain, citrus, cultivated environment2018-11-27v4No1 / 1099
415amnoncommon orchard, soil, rhizosphere, italy, citrus, cultivated environment2018-11-27v4No1 / 1279

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