dbBact

×

Experiment ID: 417

Field	Description
name	habitat environments impacted the gut microbiome of long-distance migratory swan geese but central species conserved
sra	srp094679
datamd5	906039ba237f85ab520f6f0147de8be7
mapmd5	ac95282cbe14517c66c38626d94368af

Annotations for experiment:

term enrichment score

Term	Score
swan goose	0.666667
anser cygnoides	0.500000
mongolia	0.400000
LOWER IN mongolia	0.250000
bird	0.222222
LOWER IN china	0.200000
winter	0.117647
LOWER IN winter	0.100000
summer	0.100000
LOWER IN summer	0.086957
china	0.018519
feces	0.008734

Fraction of dbbact annotations with this term covered by the query

Term	Score
swan goose	0.500000
LOWER IN mongolia	0.500000
anser cygnoides	0.333333
mongolia	0.333333
LOWER IN china	0.250000
bird	0.125000
LOWER IN winter	0.071429
winter	0.066667
LOWER IN summer	0.058824
summer	0.055556
china	0.009434
feces	0.004386

Fraction of annotations for the query sequences containing the term

Term	Score
anser cygnoides	1.000000
swan goose	1.000000
bird	1.000000
feces	1.000000
winter	0.500000
china	0.500000
mongolia	0.500000
summer	0.500000
LOWER IN mongolia	0.166667
LOWER IN summer	0.166667
LOWER IN winter	0.166667
LOWER IN china	0.166667

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
417	amnon	dominant anser cygnoides, swan goose, bird, feces, winter, china	2018-12-01	v4	No	1 / 8
417	amnon	dominant anser cygnoides, swan goose, bird, feces, mongolia, summer	2018-12-01	v4	No	1 / 10
417	amnon	common anser cygnoides, swan goose, bird, feces, mongolia, summer	2018-12-01	v4	No	1 / 68
417	amnon	common anser cygnoides, swan goose, bird, feces, winter, china	2018-12-01	v4	No	1 / 70
417	amnon	high in mongolia summer compared to winter china in anser cygnoides swan goose bird feces	2018-12-01	v4	No	1 / 114
417	amnon	high in winter china compared to mongolia summer in anser cygnoides swan goose bird feces	2018-12-01	v4	No	1 / 132

Problems / suggestions? Please email info AT dbbact DOT org