dbBact

×

Experiment ID: 417

Field	Description
name	habitat environments impacted the gut microbiome of long-distance migratory swan geese but central species conserved
sra	srp094679
datamd5	906039ba237f85ab520f6f0147de8be7
mapmd5	ac95282cbe14517c66c38626d94368af

Annotations for experiment:

term enrichment score

Term	Score
swan goose	0.666667
anser cygnoides	0.500000
mongolia	0.400000
LOWER IN mongolia	0.250000
LOWER IN china	0.200000
bird	0.200000
winter	0.111111
summer	0.095238
LOWER IN winter	0.095238
LOWER IN summer	0.083333
china	0.017544
feces	0.008097

Fraction of dbbact annotations with this term covered by the query

Term	Score
swan goose	0.500000
LOWER IN mongolia	0.500000
anser cygnoides	0.333333
mongolia	0.333333
LOWER IN china	0.250000
bird	0.111111
LOWER IN winter	0.066667
winter	0.062500
LOWER IN summer	0.055556
summer	0.052632
china	0.008929
feces	0.004065

Fraction of annotations for the query sequences containing the term

Term	Score
anser cygnoides	1.000000
swan goose	1.000000
bird	1.000000
feces	1.000000
winter	0.500000
china	0.500000
mongolia	0.500000
summer	0.500000
LOWER IN mongolia	0.166667
LOWER IN summer	0.166667
LOWER IN winter	0.166667
LOWER IN china	0.166667

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
417	amnon	dominant anser cygnoides, swan goose, bird, feces, winter, china	2018-12-01	v4	No	1 / 7
417	amnon	dominant anser cygnoides, swan goose, bird, feces, mongolia, summer	2018-12-01	v4	No	1 / 9
417	amnon	common anser cygnoides, swan goose, bird, feces, mongolia, summer	2018-12-01	v4	No	1 / 67
417	amnon	common anser cygnoides, swan goose, bird, feces, winter, china	2018-12-01	v4	No	1 / 69
417	amnon	high in mongolia summer compared to winter china in anser cygnoides swan goose bird feces	2018-12-01	v4	No	1 / 113
417	amnon	high in winter china compared to mongolia summer in anser cygnoides swan goose bird feces	2018-12-01	v4	No	1 / 131

Problems / suggestions? Please email info AT dbbact DOT org