Experiment ID: 425

Field Description
namestunted childhood growth is associated with decompartmentalization of the gastrointestinal tract and overgrowth of oropharyngeal taxa
sraprjeb27868
datamd56cfa5681f04146f16d0d76dabae81410
mapmd53a75ba2ce91bd304429c87afa4094e68

Annotations for experiment:

term enrichment score
TermScore
africa0.666667
central african republic0.437500
bangui0.437500
antananarivo0.400000
madagascar0.400000
stunted growth0.400000
LOWER IN madagascar0.181818
LOWER IN antananarivo0.181818
LOWER IN bangui0.181818
LOWER IN central african republic0.181818
duodenum0.172840
LOWER IN stunted growth0.100000
child0.095238
stomach0.090909
LOWER IN duodenum0.076923
LOWER IN feces0.060606
LOWER IN control0.013699
control0.013605
homo sapiens0.011905
feces0.009479
Fraction of dbbact annotations with this term covered by the query
TermScore
africa0.500000
central african republic0.500000
LOWER IN madagascar0.500000
bangui0.500000
LOWER IN antananarivo0.500000
antananarivo0.500000
madagascar0.500000
LOWER IN bangui0.500000
LOWER IN central african republic0.500000
stunted growth0.500000
LOWER IN stunted growth0.500000
LOWER IN duodenum0.125000
duodenum0.111111
stomach0.076923
LOWER IN feces0.066667
child0.050000
LOWER IN control0.007812
control0.007752
homo sapiens0.005988
feces0.004785
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
africa1.000000
child1.000000
feces0.500000
duodenum0.388889
central african republic0.388889
bangui0.388889
antananarivo0.333333
madagascar0.333333
stunted growth0.333333
LOWER IN madagascar0.111111
LOWER IN antananarivo0.111111
LOWER IN bangui0.111111
LOWER IN central african republic0.111111
stomach0.111111
LOWER IN feces0.055556
LOWER IN duodenum0.055556
control0.055556
LOWER IN stunted growth0.055556
LOWER IN control0.055556
Exp. ID User ID Description Date Region Flag Sequences
425amnonhigher in kids with stunted growth compared to non-stunted ( high in stunted growth compared to control in homo sapiens feces africa child )2018-12-08v4No1 / 2
425amnonhighfreq homo sapiens, feces, africa, child, central african republic, bangui2018-12-08v4No1 / 15
425amnonhighfreq homo sapiens, feces, africa, child, madagascar, antananarivo2018-12-08v4No1 / 15
425amnonlower in kids with stunted growth compared to non-stunted ( high in control compared to stunted growth in homo sapiens feces africa child )2018-12-08v4No1 / 18
425amnonhighfreq homo sapiens, africa, child, duodenum, antananarivo, madagascar, stunted growth2018-12-08v4No1 / 22
425amnonhighfreq homo sapiens, africa, child, stunted growth, stomach, central african republic, bangui2018-12-08v4No1 / 23
425amnonhighfreq homo sapiens, africa, child, duodenum, stunted growth, central african republic, bangui2018-12-08v4No1 / 25
425amnon high in central african republic bangui compared to madagascar antananarivo in homo sapiens africa child duodenum 2018-12-08v4No1 / 33
425amnoncommon homo sapiens, feces, africa, child, madagascar, antananarivo2018-12-08v4No1 / 73
425amnoncommon homo sapiens, feces, africa, child, central african republic, bangui2018-12-08v4No1 / 79
425amnon high in antananarivo madagascar compared to central african republic bangui in homo sapiens africa child duodenum 2018-12-08v4No1 / 103
425amnoncommon homo sapiens, africa, child, stunted growth, stomach2018-12-08v4No1 / 111
425amnoncommon homo sapiens, africa, child, duodenum, antananarivo, madagascar2018-12-08v4No1 / 123
425amnoncommon homo sapiens, africa, child, duodenum, stunted growth, central african republic, bangui2018-12-08v4No1 / 125
425amnon high in antananarivo madagascar compared to bangui central african republic in homo sapiens feces africa child 2018-12-08v4No1 / 248
425amnon high in feces compared to duodenum in homo sapiens africa child 2018-12-08v4No1 / 416
425amnon high in central african republic bangui compared to madagascar antananarivo in homo sapiens feces africa child 2018-12-08v4No1 / 564
425amnon high in duodenum compared to feces in homo sapiens africa child 2018-12-08v4No1 / 622

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