Experiment ID: 425

Field Description
namestunted childhood growth is associated with decompartmentalization of the gastrointestinal tract and overgrowth of oropharyngeal taxa
sraprjeb27868
datamd56cfa5681f04146f16d0d76dabae81410
mapmd53a75ba2ce91bd304429c87afa4094e68

Annotations for experiment:

term enrichment score
TermScore
bangui0.437500
antananarivo0.400000
stunted growth0.400000
central african republic0.358974
madagascar0.333333
LOWER IN antananarivo0.181818
LOWER IN bangui0.181818
LOWER IN madagascar0.166667
LOWER IN central african republic0.166667
duodenum0.147368
LOWER IN stunted growth0.100000
stomach0.076923
LOWER IN duodenum0.068966
child0.054054
africa0.051282
control0.009852
LOWER IN control0.009852
homo sapiens0.007353
feces0.006329
LOWER IN feces0.006024
Fraction of dbbact annotations with this term covered by the query
TermScore
bangui0.500000
LOWER IN antananarivo0.500000
antananarivo0.500000
LOWER IN bangui0.500000
stunted growth0.500000
LOWER IN stunted growth0.500000
central african republic0.333333
LOWER IN madagascar0.333333
madagascar0.333333
LOWER IN central african republic0.333333
duodenum0.090909
LOWER IN duodenum0.090909
stomach0.058824
child0.027778
africa0.026316
control0.005405
LOWER IN control0.005405
homo sapiens0.003690
LOWER IN feces0.003185
feces0.003185
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
child1.000000
africa1.000000
feces0.500000
duodenum0.388889
central african republic0.388889
bangui0.388889
madagascar0.333333
antananarivo0.333333
stunted growth0.333333
LOWER IN madagascar0.111111
LOWER IN antananarivo0.111111
LOWER IN central african republic0.111111
LOWER IN bangui0.111111
stomach0.111111
LOWER IN feces0.055556
LOWER IN duodenum0.055556
control0.055556
LOWER IN stunted growth0.055556
LOWER IN control0.055556
Exp. ID User ID Description Date Region Flag Sequences
425amnonhigher in kids with stunted growth compared to non-stunted ( high in stunted growth compared to control in feces homo sapiens child africa )2018-12-08v4No1 / 2
425amnondominant feces, homo sapiens, child, africa, madagascar, antananarivo2018-12-08v4No1 / 15
425amnondominant feces, homo sapiens, child, africa, central african republic, bangui2018-12-08v4No1 / 15
425amnonlower in kids with stunted growth compared to non-stunted ( high in control compared to stunted growth in feces homo sapiens child africa )2018-12-08v4No1 / 18
425amnondominant homo sapiens, duodenum, child, africa, madagascar, stunted growth, antananarivo2018-12-08v4No1 / 22
425amnondominant homo sapiens, stomach, child, africa, central african republic, bangui, stunted growth2018-12-08v4No1 / 23
425amnondominant homo sapiens, duodenum, child, africa, central african republic, bangui, stunted growth2018-12-08v4No1 / 25
425amnon high in central african republic bangui compared to madagascar antananarivo in homo sapiens duodenum child africa 2018-12-08v4No1 / 33
425amnoncommon feces, homo sapiens, child, africa, madagascar, antananarivo2018-12-08v4No1 / 73
425amnoncommon feces, homo sapiens, child, africa, central african republic, bangui2018-12-08v4No1 / 79
425amnon high in madagascar antananarivo compared to central african republic bangui in homo sapiens duodenum child africa 2018-12-08v4No1 / 103
425amnoncommon homo sapiens, stomach, child, africa, stunted growth2018-12-08v4No1 / 111
425amnoncommon homo sapiens, duodenum, child, africa, madagascar, antananarivo2018-12-08v4No1 / 123
425amnoncommon homo sapiens, duodenum, child, africa, central african republic, bangui, stunted growth2018-12-08v4No1 / 125
425amnon high in madagascar antananarivo compared to central african republic bangui in feces homo sapiens child africa 2018-12-08v4No1 / 248
425amnon high in feces compared to duodenum in homo sapiens child africa 2018-12-08v4No1 / 416
425amnon high in central african republic bangui compared to madagascar antananarivo in feces homo sapiens child africa 2018-12-08v4No1 / 564
425amnon high in duodenum compared to feces in homo sapiens child africa 2018-12-08v4No1 / 622

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