dbBact

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Experiment ID: 428

Field	Description
name	gut microbiota dysbiosis worsens the severity of acute pancreatitis in patients and mice
sra	srp125273
sra	srp133896
datamd5	574a37c6034c0f596ecc58eb904fe5ce
mapmd5	236f191b940fd773c244b6074cc5e613

Annotations for experiment:

term enrichment score

Term	Score
nanchang city prefecture	0.500000
pancreatitis	0.500000
acute pancreatitis	0.500000
LOWER IN pancreatitis	0.250000
LOWER IN acute pancreatitis	0.250000
china	0.010753
adult	0.010695
control	0.010417
LOWER IN control	0.010204
homo sapiens	0.006897
feces	0.005780

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN pancreatitis	0.500000
LOWER IN acute pancreatitis	0.500000
pancreatitis	0.500000
acute pancreatitis	0.500000
nanchang city prefecture	0.333333
china	0.005405
adult	0.005376
control	0.005263
LOWER IN control	0.005263
homo sapiens	0.003460
feces	0.002899

Fraction of annotations for the query sequences containing the term

Term	Score
homo sapiens	1.000000
adult	1.000000
feces	1.000000
nanchang city prefecture	1.000000
china	1.000000
control	0.500000
pancreatitis	0.500000
acute pancreatitis	0.500000
LOWER IN pancreatitis	0.166667
LOWER IN acute pancreatitis	0.166667
LOWER IN control	0.166667

Number of experiments associating the term to the sequence

Term	Score
homo sapiens	1.000000
adult	1.000000
feces	1.000000
nanchang city prefecture	1.000000
control	1.000000
LOWER IN pancreatitis	1.000000
LOWER IN acute pancreatitis	1.000000
china	1.000000
LOWER IN control	1.000000
pancreatitis	1.000000
acute pancreatitis	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
428	amnon	dominant homo sapiens, adult, feces, nanchang city prefecture, pancreatitis, acute pancreatitis, china	2018-12-09	v4	1 / 17	approved	No
428	amnon	dominant homo sapiens, adult, feces, nanchang city prefecture, control, china	2018-12-09	v4	1 / 18	approved	No
428	amnon	common homo sapiens, adult, feces, nanchang city prefecture, pancreatitis, acute pancreatitis, china	2018-12-09	v4	1 / 25	approved	No
428	amnon	high in pancreatitis acute pancreatitis compared to control in homo sapiens adult feces nanchang city prefecture china	2018-12-09	v4	1 / 46	approved	No
428	amnon	common homo sapiens, adult, feces, nanchang city prefecture, control, china	2018-12-09	v4	1 / 93	approved	No
428	amnon	high in control compared to pancreatitis acute pancreatitis in homo sapiens adult feces nanchang city prefecture china	2018-12-09	v4	1 / 288	approved	No

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