Experiment ID: 435

Field Description
namemarginal zinc deficiency and environmentally relevant concentrations of arsenic elicit combined effects on the gut microbiome
sraprjna473851
datamd55af06a1006766222dc895bc6dfe539e3
mapmd5241a1f70f90eb1f97f872503ae891b74

Annotations for experiment:

term enrichment score
TermScore
age 9 weeks0.434783
state of oregon0.285714
age 4 weeks0.260870
LOWER IN zinc deficiency0.200000
LOWER IN low zinc diet0.200000
zinc deficiency0.200000
low zinc diet0.200000
LOWER IN age 9 weeks0.181818
LOWER IN age 4 weeks0.153846
c57bl/60.105263
mouse0.034483
female0.031250
mus musculus0.031250
research facility0.013514
control0.010363
LOWER IN control0.010363
united states of america0.008065
feces0.006349
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN zinc deficiency0.500000
LOWER IN low zinc diet0.500000
zinc deficiency0.500000
low zinc diet0.500000
age 9 weeks0.333333
LOWER IN age 9 weeks0.333333
LOWER IN age 4 weeks0.200000
age 4 weeks0.200000
state of oregon0.166667
c57bl/60.055556
mouse0.017544
female0.015873
mus musculus0.015873
research facility0.006803
control0.005405
LOWER IN control0.005405
united states of america0.004049
feces0.003185
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
united states of america1.000000
female1.000000
research facility1.000000
mus musculus1.000000
c57bl/61.000000
state of oregon1.000000
mouse1.000000
age 9 weeks0.625000
age 4 weeks0.375000
LOWER IN age 4 weeks0.125000
LOWER IN age 9 weeks0.125000
control0.125000
LOWER IN zinc deficiency0.125000
LOWER IN low zinc diet0.125000
zinc deficiency0.125000
low zinc diet0.125000
LOWER IN control0.125000
Exp. ID User ID Description Date Region Flag Sequences
435amnondominant feces, united states of america, female, research facility, mus musculus, c57bl/6, state of oregon, mouse, age 9 weeks2018-12-23v4No1 / 7
435amnondominant feces, united states of america, female, research facility, mus musculus, c57bl/6, state of oregon, mouse, age 4 weeks2018-12-23v4No1 / 7
435amnon high in zinc deficiency low zinc diet compared to control in feces united states of america female research facility mus musculus c57bl/6 state of oregon mouse age 9 weeks 2018-12-23v4No1 / 7
435amnon high in control compared to zinc deficiency low zinc diet in feces united states of america female research facility mus musculus c57bl/6 state of oregon mouse age 9 weeks 2018-12-23v4No1 / 8
435amnoncommon feces, united states of america, female, research facility, mus musculus, c57bl/6, state of oregon, mouse, age 4 weeks2018-12-23v4No1 / 15
435amnonlower in mice at end of experiment compared to initial sample ( high in age 4 weeks compared to age 9 weeks in feces united states of america female research facility mus musculus c57bl/6 state of oregon mouse )2018-12-23v4No1 / 23
435amnoncommon feces, united states of america, female, research facility, mus musculus, c57bl/6, state of oregon, mouse, age 9 weeks2018-12-23v4No1 / 30
435amnonhigher in mice at end of experiment compared to initial sample ( high in age 9 weeks compared to age 4 weeks in feces united states of america female research facility mus musculus c57bl/6 state of oregon mouse )2018-12-23v4No1 / 73

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