dbBact

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Experiment ID: 454

Field	Description
name	père david deer gut microbiome changes across captive and translocated populations: implications for conservation
http	https://figshare.com/articles/p_re_david_deer_gut_microbiome/7388777/1
datamd5	df2ea3c1adbbbe54f9b8a86e05f3e802
mapmd5	18dc188d10e916eb66490bde1f825316

Annotations for experiment:

term enrichment score

Term	Score
elaphurus davidianus	0.666667
pere deer	0.666667
deer	0.500000
LOWER IN captive	0.125000
LOWER IN wild	0.090909
LOWER IN winter	0.071429
winter	0.066667
captive	0.063158
LOWER IN summer	0.058824
summer	0.058824
wild	0.056075
china	0.010309
feces	0.005208

Fraction of dbbact annotations with this term covered by the query

Term	Score
elaphurus davidianus	0.500000
pere deer	0.500000
deer	0.333333
LOWER IN captive	0.125000
LOWER IN wild	0.071429
LOWER IN winter	0.050000
winter	0.045455
LOWER IN summer	0.038462
summer	0.038462
captive	0.034483
wild	0.030303
china	0.005181
feces	0.002611

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
elaphurus davidianus	1.000000
pere deer	1.000000
deer	1.000000
china	1.000000
captive	0.375000
wild	0.375000
LOWER IN wild	0.125000
winter	0.125000
LOWER IN summer	0.125000
LOWER IN captive	0.125000
summer	0.125000
LOWER IN winter	0.125000

Number of experiments associating the term to the sequence

Term	Score
captive	1.000000
LOWER IN wild	1.000000
feces	1.000000
elaphurus davidianus	1.000000
pere deer	1.000000
deer	1.000000
china	1.000000
winter	1.000000
LOWER IN summer	1.000000
wild	1.000000
LOWER IN captive	1.000000
summer	1.000000
LOWER IN winter	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
454	amnon	dominant feces, elaphurus davidianus, pere deer, deer, captive, china	2019-01-10	v4	1 / 7	approved	No
454	amnon	dominant feces, elaphurus davidianus, pere deer, deer, wild, china	2019-01-10	v4	1 / 8	approved	No
454	amnon	common feces, elaphurus davidianus, pere deer, deer, wild, china	2019-01-10	v4	1 / 480	approved	No
454	amnon	common feces, elaphurus davidianus, pere deer, deer, captive, china	2019-01-10	v4	1 / 509	approved	No
454	amnon	high in summer compared to winter in elaphurus davidianus pere deer deer feces china	2019-01-10	v4	1 / 791	approved	No
454	amnon	high in wild compared to captive in elaphurus davidianus pere deer deer feces china	2019-01-10	v4	1 / 1094	approved	No
454	amnon	high in winter compared to summer in elaphurus davidianus pere deer deer feces china	2019-01-10	v4	1 / 1304	approved	No
454	amnon	high in captive compared to wild in feces elaphurus davidianus pere deer deer china	2019-01-10	v4	1 / 1374	approved	No

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