Experiment ID: 462

Field Description
namethe populus holobiont: dissecting the effects of plant niches and genotype on the microbiome
sraprjna385484
datamd5f72c81dc4a3dddacfe8a91dd9809da1b
mapmd553b58ab40478f5160743f5c772ece01c

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
populus0.500000
depth 0-30cm0.500000
silt loam0.500000
LOWER IN detph 30-75cm0.500000
LOWER IN silt clay loam0.500000
depth 30-75cm0.500000
silt clay loam0.500000
LOWER IN stem0.500000
depth 30-75cm0.500000
LOWER IN depth 0-30cm0.500000
LOWER IN silt loam0.500000
populus deltoides0.500000
LOWER IN populus trichocarpa x deltoides0.500000
populus trichocarpa x deltoides0.500000
LOWER IN populus deltoides0.500000
tree0.250000
state of tennessee0.200000
stem0.200000
LOWER IN leaf0.166667
cultivated habitat0.111111
LOWER IN root0.111111
LOWER IN soil0.083333
LOWER IN rhizosphere0.083333
root0.076923
leaf0.052632
rhizosphere0.037037
soil0.021277
united states of america0.006211
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
state of tennessee1.000000
cultivated habitat1.000000
populus0.800000
tree0.800000
soil0.233333
stem0.233333
rhizosphere0.200000
depth 0-30cm0.166667
silt loam0.166667
silt clay loam0.166667
leaf0.166667
populus deltoides0.166667
root0.166667
populus trichocarpa x deltoides0.166667
depth 30-75cm0.133333
LOWER IN populus trichocarpa x deltoides0.100000
LOWER IN populus deltoides0.100000
LOWER IN rhizosphere0.066667
LOWER IN root0.033333
LOWER IN detph 30-75cm0.033333
LOWER IN silt clay loam0.033333
LOWER IN soil0.033333
LOWER IN stem0.033333
depth 30-75cm0.033333
LOWER IN depth 0-30cm0.033333
LOWER IN silt loam0.033333
LOWER IN leaf0.033333
Exp. ID User ID Description Date Sequences
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, rhizosphere, populus, tree, depth 0-30cm, silt loam2019-01-131 / 3
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, populus, tree, stem, populus deltoides2019-01-131 / 3
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, soil, depth 0-30cm, silt loam2019-01-131 / 4
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, depth 30-75cm, silt clay loam, rhizosphere, populus, tree2019-01-131 / 6
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, soil, depth 30-75cm, silt clay loam2019-01-131 / 8
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, populus, tree, root2019-01-131 / 9
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, populus, tree, populus trichocarpa x deltoides, stem2019-01-131 / 12
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, populus, tree, leaf2019-01-131 / 15
462amnoncommon united states of america, state of tennessee, cultivated habitat, populus, tree, leaf2019-01-131 / 28
462amnoncommon united states of america, state of tennessee, cultivated habitat, populus, tree, stem, populus deltoides2019-01-131 / 29
462amnoncommon united states of america, state of tennessee, cultivated habitat, populus, tree, populus trichocarpa x deltoides, stem2019-01-131 / 48
462amnoncommon united states of america, state of tennessee, cultivated habitat, populus, tree, root2019-01-131 / 51
462amnon high in root compared to rhizosphere in united states of america state of tennessee cultivated habitat populus tree 2019-01-131 / 57
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee cultivated habitat populus tree leaf 2019-01-131 / 76
462amnon high in soil compared to rhizosphere in united states of america state of tennessee cultivated habitat populus tree 2019-01-121 / 131
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee cultivated habitat populus tree stem 2019-01-131 / 166
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee cultivated habitat populus tree stem 2019-01-131 / 249
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee cultivated habitat populus tree root 2019-01-131 / 254
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee cultivated habitat populus tree root 2019-01-131 / 300
462amnon high in stem compared to leaf in united states of america state of tennessee cultivated habitat populus tree 2019-01-131 / 477
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee cultivated habitat populus tree leaf 2019-01-131 / 559
462amnon high in depth 30-75cm silt clay loam compared to depth 0-30cm silt loam in soil united states of america state of tennessee cultivated habitat 2019-01-121 / 665
462amnoncommon united states of america, state of tennessee, cultivated habitat, soil, depth 30-75cm, silt clay loam2019-01-131 / 728
462amnon high in leaf compared to stem in united states of america state of tennessee cultivated habitat populus tree 2019-01-131 / 890
462amnoncommon united states of america, state of tennessee, cultivated habitat, depth 30-75cm, silt clay loam, rhizosphere, populus, tree2019-01-131 / 908
462amnoncommon united states of america, state of tennessee, cultivated habitat, soil, depth 0-30cm, silt loam2019-01-131 / 938
462amnoncommon united states of america, state of tennessee, cultivated habitat, rhizosphere, populus, tree, depth 0-30cm, silt loam2019-01-131 / 997
462amnon high in rhizosphere compared to soil in united states of america state of tennessee cultivated habitat populus tree 2019-01-121 / 1428
462amnon high in depth 0-30cm silt loam compared to detph 30-75cm silt clay loam in soil united states of america state of tennessee cultivated habitat 2019-01-121 / 1648
462amnon high in rhizosphere compared to root in united states of america state of tennessee cultivated habitat populus tree 2019-01-131 / 4630

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