Experiment ID: 462

Field Description
namethe populus holobiont: dissecting the effects of plant niches and genotype on the microbiome
sraprjna385484
datamd5f72c81dc4a3dddacfe8a91dd9809da1b
mapmd553b58ab40478f5160743f5c772ece01c

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
populus0.500000
LOWER IN silt clay loam0.500000
LOWER IN detph 30-75cm0.500000
silt clay loam0.500000
depth 30-75cm0.500000
populus deltoides0.500000
LOWER IN populus trichocarpa x deltoides0.500000
populus trichocarpa x deltoides0.500000
LOWER IN populus deltoides0.500000
depth (soil) 0-30 cm0.250000
LOWER IN depth (soil) 0-30 cm0.250000
state of tennessee0.200000
silt loam0.166667
LOWER IN silt loam0.166667
LOWER IN stem0.142857
stem0.142857
cultivated environment0.125000
tree0.100000
depth (soil) 20-60cm0.071429
leaf0.050000
LOWER IN leaf0.050000
depth (soil) 0-20cm0.025000
LOWER IN depth (soil) 0-20cm0.025000
rhizosphere0.022727
LOWER IN rhizosphere0.022727
soil0.010101
LOWER IN soil0.010101
united states of america0.004049
LOWER IN root0.001458
root0.001458
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
state of tennessee1.000000
cultivated environment1.000000
populus0.800000
tree0.800000
soil0.233333
stem0.233333
rhizosphere0.200000
silt loam0.166667
depth (soil) 0-20cm0.166667
depth (soil) 0-30 cm0.166667
silt clay loam0.166667
depth 30-75cm0.166667
depth (soil) 20-60cm0.166667
leaf0.166667
populus deltoides0.166667
populus trichocarpa x deltoides0.166667
root0.166667
LOWER IN populus trichocarpa x deltoides0.100000
LOWER IN populus deltoides0.100000
LOWER IN rhizosphere0.066667
LOWER IN root0.033333
LOWER IN silt clay loam0.033333
LOWER IN detph 30-75cm0.033333
LOWER IN soil0.033333
LOWER IN stem0.033333
LOWER IN silt loam0.033333
LOWER IN depth (soil) 0-20cm0.033333
LOWER IN depth (soil) 0-30 cm0.033333
LOWER IN leaf0.033333
Exp. ID User ID Description Date Region Flag Sequences
462amnondominant united states of america, state of tennessee, stem, populus, populus deltoides, tree, cultivated environment2019-01-13v4No1 / 3
462amnondominant united states of america, state of tennessee, rhizosphere, populus, tree, silt loam, cultivated environment, depth (soil) 0-20cm, depth (soil) 0-30 cm2019-01-13v4No1 / 3
462amnondominant united states of america, state of tennessee, soil, silt loam, cultivated environment, depth (soil) 0-20cm, depth (soil) 0-30 cm2019-01-13v4No1 / 4
462amnondominant united states of america, state of tennessee, rhizosphere, populus, tree, silt clay loam, depth 30-75cm, cultivated environment, depth (soil) 20-60cm2019-01-13v4No1 / 6
462amnondominant united states of america, state of tennessee, soil, silt clay loam, depth 30-75cm, cultivated environment, depth (soil) 20-60cm2019-01-13v4No1 / 8
462amnondominant united states of america, state of tennessee, populus, tree, cultivated environment, root2019-01-13v4No1 / 9
462amnondominant united states of america, state of tennessee, stem, populus, tree, populus trichocarpa x deltoides, cultivated environment2019-01-13v4No1 / 12
462amnondominant united states of america, state of tennessee, leaf, populus, tree, cultivated environment2019-01-13v4No1 / 15
462amnoncommon united states of america, state of tennessee, leaf, populus, tree, cultivated environment2019-01-13v4No1 / 28
462amnoncommon united states of america, state of tennessee, stem, populus, populus deltoides, tree, cultivated environment2019-01-13v4No1 / 29
462amnoncommon united states of america, state of tennessee, stem, populus, tree, populus trichocarpa x deltoides, cultivated environment2019-01-13v4No1 / 48
462amnoncommon united states of america, state of tennessee, populus, tree, cultivated environment, root2019-01-13v4No1 / 51
462amnon high in root compared to rhizosphere in united states of america state of tennessee populus tree cultivated environment 2019-01-13v4No1 / 57
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee leaf populus tree cultivated environment 2019-01-13v4No1 / 76
462amnon high in soil compared to rhizosphere in united states of america state of tennessee populus tree cultivated environment 2019-01-12v4No1 / 131
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee stem populus tree cultivated environment 2019-01-13v4No1 / 166
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee stem populus tree cultivated environment 2019-01-13v4No1 / 249
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee populus tree cultivated environment root 2019-01-13v4No1 / 254
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee populus tree cultivated environment root 2019-01-13v4No1 / 300
462amnon high in stem compared to leaf in united states of america state of tennessee populus tree cultivated environment 2019-01-13v4No1 / 477
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee leaf populus tree cultivated environment 2019-01-13v4No1 / 559
462amnon high in silt clay loam depth 30-75cm depth (soil) 20-60cm compared to silt loam depth (soil) 0-20cm depth (soil) 0-30 cm in united states of america state of tennessee soil cultivated environment 2019-01-12v4No1 / 665
462amnoncommon united states of america, state of tennessee, soil, silt clay loam, depth 30-75cm, cultivated environment, depth (soil) 20-60cm2019-01-13v4No1 / 728
462amnon high in leaf compared to stem in united states of america state of tennessee populus tree cultivated environment 2019-01-13v4No1 / 890
462amnoncommon united states of america, state of tennessee, rhizosphere, populus, tree, silt clay loam, depth 30-75cm, cultivated environment, depth (soil) 20-60cm2019-01-13v4No1 / 908
462amnoncommon united states of america, state of tennessee, soil, silt loam, cultivated environment, depth (soil) 0-20cm, depth (soil) 0-30 cm2019-01-13v4No1 / 938
462amnoncommon united states of america, state of tennessee, rhizosphere, populus, tree, silt loam, cultivated environment, depth (soil) 0-20cm, depth (soil) 0-30 cm2019-01-13v4No1 / 997
462amnon high in rhizosphere compared to soil in united states of america state of tennessee populus tree cultivated environment 2019-01-12v4No1 / 1428
462amnon high in silt loam depth (soil) 0-20cm depth (soil) 0-30 cm compared to silt clay loam detph 30-75cm in united states of america state of tennessee soil cultivated environment 2019-01-12v4No1 / 1648
462amnon high in rhizosphere compared to root in united states of america state of tennessee populus tree cultivated environment 2019-01-13v4No1 / 4630

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