Experiment ID: 465

Field Description
namedrought stress results in a compartment-specific restructuring of the rice root-associated microbiomes
name prjna386367
srasrp106909
datamd5f39d31ba6d3a747eb935e22f7334784e
mapmd54f49c701e60afddf054ffa4b7b861986

Annotations for experiment:

term enrichment score
TermScore
paddy field0.666667
arbuckle, ca0.400000
davis, ca0.400000
biggs, ca0.400000
rice0.333333
oryza sativa0.285714
LOWER IN drought environment0.142857
drought environment0.142857
root0.122449
LOWER IN root0.105263
state of california0.105263
LOWER IN rhizosphere0.090909
LOWER IN soil0.074074
rhizosphere0.068966
soil0.039735
research facility0.021978
LOWER IN control0.017699
control0.017391
united states of america0.012346
Fraction of dbbact annotations with this term covered by the query
TermScore
paddy field0.500000
arbuckle, ca0.500000
davis, ca0.500000
biggs, ca0.500000
LOWER IN drought environment0.250000
drought environment0.250000
rice0.200000
oryza sativa0.166667
LOWER IN root0.111111
LOWER IN soil0.083333
LOWER IN rhizosphere0.083333
root0.076923
state of california0.055556
rhizosphere0.037037
soil0.021277
research facility0.011111
LOWER IN control0.009709
control0.009524
united states of america0.006211
Fraction of annotations for the query sequences containing the term
TermScore
paddy field1.000000
oryza sativa1.000000
rice1.000000
state of california1.000000
united states of america1.000000
research facility1.000000
rhizosphere0.500000
arbuckle, ca0.333333
davis, ca0.333333
biggs, ca0.333333
soil0.300000
root0.300000
LOWER IN root0.100000
control0.100000
LOWER IN drought environment0.100000
drought environment0.100000
LOWER IN control0.100000
LOWER IN rhizosphere0.100000
LOWER IN soil0.066667
Exp. ID User ID Description Date Sequences
465amnon high in drought environment compared to control in paddy field oryza sativa rice state of california united states of america research facility rhizosphere biggs, ca 2019-01-131 / 5
465amnon high in control compared to drought environment in paddy field oryza sativa rice state of california united states of america research facility davis, ca rhizosphere 2019-01-131 / 11
465amnonhighfreq paddy field, oryza sativa, rice, state of california, united states of america, research facility, davis, ca, root2019-01-131 / 13
465amnonhighfreq paddy field, oryza sativa, rice, state of california, united states of america, research facility, biggs, ca, root2019-01-131 / 15
465amnonhighfreq paddy field, oryza sativa, rice, state of california, united states of america, research facility, davis, ca, rhizosphere2019-01-131 / 15
465amnon high in drought environment compared to control in paddy field oryza sativa rice state of california united states of america research facility davis, ca rhizosphere 2019-01-131 / 16
465amnonhighfreq soil, paddy field, oryza sativa, rice, state of california, united states of america, research facility, arbuckle, ca2019-01-131 / 16
465amnonhighfreq paddy field, oryza sativa, rice, state of california, united states of america, research facility, arbuckle, ca, root2019-01-131 / 16
465amnonhighfreq paddy field, oryza sativa, rice, state of california, united states of america, research facility, arbuckle, ca, rhizosphere2019-01-131 / 17
465amnonhighfreq paddy field, oryza sativa, rice, state of california, united states of america, research facility, davis, ca, soil2019-01-131 / 18
465amnonhighfreq paddy field, oryza sativa, rice, state of california, united states of america, research facility, biggs, ca, soil2019-01-131 / 19
465amnon high in root compared to soil rhizosphere in paddy field oryza sativa rice state of california united states of america research facility arbuckle, ca 2019-01-131 / 22
465amnonhighfreq paddy field, oryza sativa, rice, state of california, united states of america, research facility, biggs, ca, rhizosphere2019-01-131 / 23
465amnon high in root compared to rhizosphere in paddy field oryza sativa rice state of california united states of america research facility biggs, ca 2019-01-131 / 24
465amnon high in root compared to soil rhizosphere in paddy field oryza sativa rice state of california united states of america research facility davis, ca 2019-01-131 / 27
465amnon high in control compared to drought environment in paddy field oryza sativa rice state of california united states of america research facility rhizosphere biggs, ca 2019-01-131 / 30
465amnoncommon paddy field, oryza sativa, rice, state of california, united states of america, research facility, davis, ca, root2019-01-131 / 32
465amnon high in drought environment compared to control in paddy field oryza sativa rice state of california united states of america research facility rhizosphere arbuckle, ca 2019-01-131 / 33
465amnoncommon paddy field, oryza sativa, rice, state of california, united states of america, research facility, arbuckle, ca, root2019-01-131 / 34
465amnon high in control compared to drought environment in paddy field oryza sativa rice state of california united states of america research facility rhizosphere arbuckle, ca 2019-01-131 / 38
465amnoncommon paddy field, oryza sativa, rice, state of california, united states of america, research facility, biggs, ca, root2019-01-131 / 40
465amnoncommon paddy field, oryza sativa, rice, state of california, united states of america, research facility, biggs, ca, rhizosphere2019-01-131 / 82
465amnoncommon paddy field, oryza sativa, rice, state of california, united states of america, research facility, biggs, ca, soil2019-01-131 / 90
465amnoncommon paddy field, oryza sativa, rice, state of california, united states of america, research facility, davis, ca, rhizosphere2019-01-131 / 118
465amnoncommon paddy field, oryza sativa, rice, state of california, united states of america, research facility, arbuckle, ca, rhizosphere2019-01-131 / 144
465amnoncommon paddy field, oryza sativa, rice, state of california, united states of america, research facility, davis, ca, soil2019-01-131 / 179
465amnoncommon soil, paddy field, oryza sativa, rice, state of california, united states of america, research facility, arbuckle, ca2019-01-131 / 195
465amnon high in soil rhizosphere compared to root in paddy field oryza sativa rice state of california united states of america research facility biggs, ca 2019-01-131 / 260
465amnon high in soil rhizosphere compared to root in paddy field oryza sativa rice state of california united states of america research facility davis, ca 2019-01-131 / 320
465amnon high in rhizosphere soil compared to root in paddy field oryza sativa rice state of california united states of america research facility arbuckle, ca 2019-01-131 / 436

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