Experiment ID: 466

Field Description
namerapid microbiome changes in freshly deposited cow feces under field conditions
sraprjna297907
datamd5d6dfaab5c5d2f23877d2a63711f6ae82
mapmd561271a5af7b7a75da3cc59d5540db2da

Annotations for experiment:

term enrichment score
TermScore
30-60 days0.555556
state of georgia0.500000
cow0.285714
late timepoints0.232558
0-2 days0.200000
LOWER IN 30-60 days0.200000
LOWER IN 0-2 days0.200000
shaded0.200000
LOWER IN unshaded0.200000
LOWER IN sunlight0.200000
unshaded0.200000
sunlight0.200000
LOWER IN shaded0.200000
bos taurus0.181818
LOWER IN early timepoints0.133333
early timepoints0.117647
LOWER IN late timepoints0.117647
farm0.086957
united states of america0.010753
feces0.010000
Fraction of dbbact annotations with this term covered by the query
TermScore
0-2 days0.500000
LOWER IN 30-60 days0.500000
30-60 days0.500000
LOWER IN 0-2 days0.500000
shaded0.500000
LOWER IN unshaded0.500000
LOWER IN sunlight0.500000
unshaded0.500000
sunlight0.500000
LOWER IN shaded0.500000
state of georgia0.333333
cow0.166667
late timepoints0.142857
LOWER IN early timepoints0.142857
early timepoints0.111111
LOWER IN late timepoints0.111111
bos taurus0.100000
farm0.045455
united states of america0.005405
feces0.005025
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
bos taurus1.000000
cow1.000000
farm1.000000
united states of america1.000000
state of georgia1.000000
late timepoints0.625000
30-60 days0.625000
early timepoints0.125000
0-2 days0.125000
LOWER IN late timepoints0.125000
LOWER IN 30-60 days0.125000
LOWER IN early timepoints0.125000
LOWER IN 0-2 days0.125000
shaded0.125000
LOWER IN unshaded0.125000
LOWER IN sunlight0.125000
unshaded0.125000
sunlight0.125000
LOWER IN shaded0.125000
Exp. ID User ID Description Date Region Flag Sequences
466amnonhighfreq feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 9
466amnonhigh freq. in cow feces left in field for 30-60 days (highfreq feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 18
466amnonlower in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in unshaded sunlight compared to shaded in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 112
466amnoncommon in cow feces left in field for 30-60 days (common feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 221
466amnonhigher in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in shaded compared to unshaded sunlight in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 432
466amnonhigher in cow feces left in field for 30-60 days compared to initial feces ( high in late timepoints 30-60 days compared to early timepoints 0-2 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 662
466amnoncommon feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 783
466amnonlower in cow feces left in field for 30-60 days compared to initial feces ( high in early timepoints 0-2 days compared to late timepoints 30-60 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 1329

Problems / suggestions? Please email info AT dbbact DOT org