Experiment ID: 477

Field Description
namegut microbiome transition across a lifestyle gradient in himalaya
sraerp111414
qiita11947
datamd55e75fe8d9574955f9d2005f3c6605d4f
mapmd510e5b67fbd8cb750abe51fc25a1f59dc

Annotations for experiment:

term enrichment score
TermScore
himalayas0.611111
nepal0.468085
chepang0.300000
tharu0.300000
agrarian0.300000
forager0.260870
raji0.222222
raute0.222222
rural community0.177419
LOWER IN nepal0.125000
LOWER IN himalayas0.125000
LOWER IN tharu0.125000
LOWER IN agrarian0.125000
LOWER IN chepang0.125000
LOWER IN forager0.125000
LOWER IN rural community0.100000
LOWER IN united states of america0.086957
adult0.017637
homo sapiens0.010000
united states of america0.009274
feces0.008065
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN nepal0.500000
LOWER IN himalayas0.500000
himalayas0.500000
chepang0.500000
raji0.500000
raute0.500000
tharu0.500000
agrarian0.500000
LOWER IN tharu0.500000
LOWER IN agrarian0.500000
LOWER IN chepang0.500000
LOWER IN forager0.500000
nepal0.333333
forager0.333333
LOWER IN rural community0.166667
LOWER IN united states of america0.111111
rural community0.100000
adult0.008929
homo sapiens0.005025
united states of america0.004739
feces0.004049
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
feces1.000000
nepal0.785714
rural community0.785714
himalayas0.785714
adult0.714286
united states of america0.214286
forager0.214286
chepang0.214286
tharu0.214286
agrarian0.214286
raji0.142857
raute0.142857
LOWER IN nepal0.071429
LOWER IN himalayas0.071429
LOWER IN rural community0.071429
LOWER IN united states of america0.071429
LOWER IN tharu0.071429
LOWER IN agrarian0.071429
LOWER IN chepang0.071429
LOWER IN forager0.071429
Exp. ID User ID Description Date Region Flag Sequences
477amnondominant homo sapiens, feces, adult, nepal, himalayas, rural community, tharu, agrarian2019-01-28v4No1 / 13
477amnondominant homo sapiens, feces, adult, nepal, himalayas, rural community, forager, chepang2019-01-28v4No1 / 17
477amnondominant homo sapiens, feces, himalayas, nepal, rural community, raute2019-01-29v4No1 / 18
477amnondominant homo sapiens, feces, adult, united states of america2019-01-28v4No1 / 18
477amnonhigher in agrarian tharu population compared to foraging chepang population ( high in tharu agrarian compared to chepang forager in homo sapiens feces adult himalayas nepal rural community )2019-01-28v4No1 / 18
477amnondominant homo sapiens, feces, himalayas, nepal, rural community, raji2019-01-29v4No1 / 19
477amnonlower in agrarian tharu population compared to foraging chepang population ( high in chepang forager compared to tharu agrarian in homo sapiens feces adult himalayas nepal rural community )2019-01-28v4No1 / 72
477amnoncommon homo sapiens, feces, adult, nepal, himalayas, rural community, tharu, agrarian2019-01-28v4No1 / 73
477amnoncommon homo sapiens, feces, himalayas, nepal, rural community, raute2019-01-29v4No1 / 75
477amnoncommon homo sapiens, feces, himalayas, nepal, rural community, raji2019-01-29v4No1 / 87
477amnoncommon homo sapiens, feces, adult, nepal, himalayas, rural community, forager, chepang2019-01-28v4No1 / 96
477amnoncommon homo sapiens, feces, adult, united states of america2019-01-28v4No1 / 102
477amnon high in nepal rural community himalayas compared to united states of america in homo sapiens feces adult 2019-01-28v4No1 / 110
477amnon high in united states of america compared to nepal himalayas rural community in homo sapiens feces adult 2019-01-28v4No1 / 294

Problems / suggestions? Please email info AT dbbact DOT org