Experiment ID: 477

Field Description
namegut microbiome transition across a lifestyle gradient in himalaya
sraerp111414
qiita11947
datamd55e75fe8d9574955f9d2005f3c6605d4f
mapmd510e5b67fbd8cb750abe51fc25a1f59dc

Annotations for experiment:

term enrichment score
TermScore
himalayas0.611111
nepal0.468085
chepang0.300000
tharu0.300000
agrarian0.300000
forager0.260870
raji0.222222
raute0.222222
LOWER IN nepal0.125000
LOWER IN himalayas0.125000
LOWER IN tharu0.125000
LOWER IN agrarian0.125000
LOWER IN chepang0.125000
LOWER IN forager0.125000
rural community0.115789
LOWER IN rural community0.090909
LOWER IN united states of america0.080000
adult0.009643
united states of america0.006977
homo sapiens0.006173
feces0.005208
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN nepal0.500000
LOWER IN himalayas0.500000
himalayas0.500000
chepang0.500000
raji0.500000
raute0.500000
tharu0.500000
agrarian0.500000
LOWER IN tharu0.500000
LOWER IN agrarian0.500000
LOWER IN chepang0.500000
LOWER IN forager0.500000
nepal0.333333
forager0.333333
LOWER IN rural community0.125000
LOWER IN united states of america0.090909
rural community0.062500
adult0.004854
united states of america0.003546
homo sapiens0.003096
feces0.002611
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
feces1.000000
nepal0.785714
rural community0.785714
himalayas0.785714
adult0.714286
united states of america0.214286
forager0.214286
chepang0.214286
tharu0.214286
agrarian0.214286
raji0.142857
raute0.142857
LOWER IN nepal0.071429
LOWER IN himalayas0.071429
LOWER IN rural community0.071429
LOWER IN united states of america0.071429
LOWER IN tharu0.071429
LOWER IN agrarian0.071429
LOWER IN chepang0.071429
LOWER IN forager0.071429
Number of experiments associating the term to the sequence
TermScore
homo sapiens1.000000
feces1.000000
adult1.000000
united states of america1.000000
LOWER IN nepal1.000000
LOWER IN himalayas1.000000
LOWER IN rural community1.000000
nepal1.000000
rural community1.000000
himalayas1.000000
LOWER IN united states of america1.000000
forager1.000000
chepang1.000000
raji1.000000
raute1.000000
tharu1.000000
agrarian1.000000
LOWER IN tharu1.000000
LOWER IN agrarian1.000000
LOWER IN chepang1.000000
LOWER IN forager1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
477amnondominant homo sapiens, feces, adult, nepal, himalayas, rural community, tharu, agrarian2019-01-28v41 / 14approvedNo
477amnondominant homo sapiens, feces, adult, nepal, himalayas, rural community, forager, chepang2019-01-28v41 / 18approvedNo
477amnondominant homo sapiens, feces, adult, united states of america2019-01-28v41 / 19approvedNo
477amnondominant homo sapiens, feces, himalayas, nepal, rural community, raute2019-01-29v41 / 19approvedNo
477amnonhigher in agrarian tharu population compared to foraging chepang population ( high in tharu agrarian compared to chepang forager in homo sapiens feces adult himalayas nepal rural community )2019-01-28v41 / 19approvedNo
477amnondominant homo sapiens, feces, himalayas, nepal, rural community, raji2019-01-29v41 / 20approvedNo
477amnonlower in agrarian tharu population compared to foraging chepang population ( high in chepang forager compared to tharu agrarian in homo sapiens feces adult himalayas nepal rural community )2019-01-28v41 / 73approvedNo
477amnoncommon homo sapiens, feces, adult, nepal, himalayas, rural community, tharu, agrarian2019-01-28v41 / 74approvedNo
477amnoncommon homo sapiens, feces, himalayas, nepal, rural community, raute2019-01-29v41 / 76approvedNo
477amnoncommon homo sapiens, feces, himalayas, nepal, rural community, raji2019-01-29v41 / 88approvedNo
477amnoncommon homo sapiens, feces, adult, nepal, himalayas, rural community, forager, chepang2019-01-28v41 / 97approvedNo
477amnoncommon homo sapiens, feces, adult, united states of america2019-01-28v41 / 103approvedNo
477amnon high in nepal rural community himalayas compared to united states of america in homo sapiens feces adult 2019-01-28v41 / 111approvedNo
477amnon high in united states of america compared to nepal himalayas rural community in homo sapiens feces adult 2019-01-28v41 / 295approvedNo

Problems / suggestions? Please email info AT dbbact DOT org