Experiment ID: 494

Field Description
namebifidobacteria or fiber protects against dietinduced microbiota-mediated colonic mucus deterioration
sraprjeb20367
datamd5b69d4c93c27aee215ac6cf91de20b524
mapmd5afca12f330f23a8a5530e4f3ae9ec97c

Annotations for experiment:

term enrichment score
TermScore
charles river laboratories0.400000
western diet0.300000
colonic lumen0.200000
LOWER IN colonic lumen0.200000
LOWER IN diet0.181818
LOWER IN colonic mucosa0.181818
LOWER IN western diet0.166667
colonic mucosa0.166667
sweden0.117647
mouse chow0.113208
high fat diet0.113208
LOWER IN high fat diet0.090909
colon0.082192
c57bl/60.080000
LOWER IN mouse chow0.080000
diet0.062500
male0.040816
mouse0.029851
mus musculus0.027027
research facility0.010695
Fraction of dbbact annotations with this term covered by the query
TermScore
colonic lumen0.500000
LOWER IN colonic lumen0.500000
LOWER IN diet0.333333
LOWER IN colonic mucosa0.333333
LOWER IN western diet0.250000
charles river laboratories0.250000
western diet0.250000
colonic mucosa0.250000
LOWER IN high fat diet0.071429
mouse chow0.066667
high fat diet0.066667
sweden0.062500
LOWER IN mouse chow0.058824
colon0.043478
c57bl/60.041667
diet0.041667
male0.020833
mouse0.015152
mus musculus0.013699
research facility0.005376
Fraction of annotations for the query sequences containing the term
TermScore
research facility1.000000
mus musculus1.000000
c57bl/61.000000
male1.000000
sweden1.000000
mouse1.000000
charles river laboratories1.000000
colon0.750000
mouse chow0.375000
high fat diet0.375000
western diet0.375000
LOWER IN diet0.125000
LOWER IN high fat diet0.125000
LOWER IN western diet0.125000
diet0.125000
LOWER IN mouse chow0.125000
colonic lumen0.125000
LOWER IN colonic mucosa0.125000
colonic mucosa0.125000
LOWER IN colonic lumen0.125000
Number of experiments associating the term to the sequence
TermScore
mouse chow1.000000
LOWER IN diet1.000000
LOWER IN high fat diet1.000000
LOWER IN western diet1.000000
research facility1.000000
colon1.000000
mus musculus1.000000
c57bl/61.000000
male1.000000
sweden1.000000
mouse1.000000
charles river laboratories1.000000
high fat diet1.000000
western diet1.000000
diet1.000000
LOWER IN mouse chow1.000000
colonic lumen1.000000
LOWER IN colonic mucosa1.000000
colonic mucosa1.000000
LOWER IN colonic lumen1.000000

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