dbBact

×

Experiment ID: 500

Field	Description
name	deep ocean prokaryotic communities are remarkably malleable when facing long-term starvation
sra	prjeb23334
sra	ers1993945
datamd5	f259a7d9180d582ef9e4705204abc0c3
mapmd5	cbb8e9c61a6ffa09acd49daacd02cf46

Annotations for experiment:

term enrichment score

Term	Score
depth (water) 2000-5000m	0.400000
depth (water) 2000-3000m	0.400000
depth (water) 0cm	0.400000
LOWER IN depth (water) 0cm	0.333333
mediterranean sea	0.285714
LOWER IN late time points	0.250000
early time points	0.250000
late time points	0.200000
LOWER IN early time points	0.200000
sea water	0.046512
water	0.035714

Fraction of dbbact annotations with this term covered by the query

Term	Score
depth (water) 0cm	0.333333
depth (water) 2000-5000m	0.250000
LOWER IN depth (water) 0cm	0.250000
depth (water) 2000-3000m	0.250000
mediterranean sea	0.166667
LOWER IN late time points	0.166667
early time points	0.166667
late time points	0.125000
LOWER IN early time points	0.125000
sea water	0.023810
water	0.018182

Fraction of annotations for the query sequences containing the term

Term	Score
depth (water) 2000-5000m	1.000000
water	1.000000
mediterranean sea	1.000000
depth (water) 2000-3000m	1.000000
sea water	1.000000
LOWER IN depth (water) 0cm	0.500000
LOWER IN late time points	0.500000
early time points	0.500000
depth (water) 0cm	0.500000
late time points	0.500000
LOWER IN early time points	0.500000

Number of experiments associating the term to the sequence

Term	Score
depth (water) 2000-5000m	1.000000
LOWER IN depth (water) 0cm	1.000000
water	1.000000
mediterranean sea	1.000000
LOWER IN late time points	1.000000
depth (water) 2000-3000m	1.000000
early time points	1.000000
sea water	1.000000
depth (water) 0cm	1.000000
late time points	1.000000
LOWER IN early time points	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
500	amnon	increases when incubating water sample from depth 2100m at depth 0m for one year ( high in depth (water) 0cm late time points compared to early time points in depth (water) 2000-5000m water mediterranean sea depth (water) 2000-3000m sea water )	2019-03-05	v4	1 / 114	approved	No
500	amnon	decreases when incubating water sample from depth 2100m at depth 0m for one year ( high in early time points compared to depth (water) 0cm late time points in depth (water) 2000-5000m water mediterranean sea depth (water) 2000-3000m sea water )	2019-03-05	v4	1 / 132	approved	No

Problems / suggestions? Please email info AT dbbact DOT org