Experiment ID: 508

Field Description
namemolecular evidence for novel mercury methylating microorganisms in sulfate-impacted lakes
sraprjna488162
datamd58a4655a7db46c3f949e3d31dd5fe5430
mapmd5259a388d0f3762a601c73030f833a30b

Annotations for experiment:

term enrichment score
TermScore
manganika lake0.545455
hypereutrophic lake0.545455
sulfidic bottom water0.545455
mcquade lake0.444444
lake water0.352941
LOWER IN lake water0.285714
LOWER IN lake sediment0.285714
lake sediment0.235294
LOWER IN lake0.222222
state of minnesota0.200000
lake0.187500
LOWER IN fresh water0.166667
LOWER IN sediment0.166667
LOWER IN water0.111111
fresh water0.081081
sediment0.063492
water0.035294
united states of america0.007067
Fraction of dbbact annotations with this term covered by the query
TermScore
manganika lake0.500000
hypereutrophic lake0.500000
sulfidic bottom water0.500000
mcquade lake0.500000
LOWER IN lake water0.500000
LOWER IN lake sediment0.500000
LOWER IN lake0.250000
lake water0.250000
lake sediment0.166667
LOWER IN fresh water0.142857
LOWER IN sediment0.142857
state of minnesota0.111111
lake0.111111
LOWER IN water0.076923
fresh water0.043478
sediment0.034483
water0.018182
united states of america0.003546
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
state of minnesota1.000000
manganika lake0.600000
hypereutrophic lake0.600000
sulfidic bottom water0.600000
lake0.600000
lake water0.600000
fresh water0.600000
water0.600000
sediment0.400000
lake sediment0.400000
mcquade lake0.400000
LOWER IN lake0.200000
LOWER IN lake water0.200000
LOWER IN fresh water0.200000
LOWER IN water0.200000
LOWER IN sediment0.200000
LOWER IN lake sediment0.200000
Number of experiments associating the term to the sequence
TermScore
united states of america1.000000
state of minnesota1.000000
manganika lake1.000000
hypereutrophic lake1.000000
sulfidic bottom water1.000000
sediment1.000000
lake sediment1.000000
mcquade lake1.000000
LOWER IN lake1.000000
LOWER IN lake water1.000000
LOWER IN fresh water1.000000
LOWER IN water1.000000
lake1.000000
lake water1.000000
fresh water1.000000
water1.000000
LOWER IN sediment1.000000
LOWER IN lake sediment1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
508amnondominant united states of america, state of minnesota, manganika lake, hypereutrophic lake, sulfidic bottom water, sediment, lake sediment2019-03-17v41 / 13approvedNo
508amnondominant united states of america, state of minnesota, mcquade lake, lake, lake water, fresh water, water2019-03-17v41 / 14approvedNo
508amnondominant united states of america, state of minnesota, manganika lake, hypereutrophic lake, sulfidic bottom water, water, lake water, fresh water, lake2019-03-17v41 / 15approvedNo
508amnon high in water fresh water lake water lake compared to sediment lake sediment in united states of america state of minnesota manganika lake hypereutrophic lake sulfidic bottom water 2019-03-17v41 / 91approvedNo
508amnoncommon united states of america, state of minnesota, manganika lake, hypereutrophic lake, sulfidic bottom water, water, lake water, fresh water, lake2019-03-17v41 / 196approvedNo
508amnon high in water lake lake water fresh water compared to sediment lake sediment in united states of america state of minnesota mcquade lake 2019-03-17v41 / 214approvedNo
508amnoncommon united states of america, state of minnesota, mcquade lake, lake, lake water, fresh water, water2019-03-17v41 / 336approvedNo
508amnon high in sediment lake sediment compared to water fresh water lake water lake in united states of america state of minnesota manganika lake hypereutrophic lake sulfidic bottom water 2019-03-17v41 / 422approvedNo
508amnon high in sediment lake sediment compared to lake lake water fresh water water in united states of america state of minnesota mcquade lake 2019-03-17v41 / 446approvedNo
508amnoncommon united states of america, state of minnesota, manganika lake, hypereutrophic lake, sulfidic bottom water, sediment, lake sediment2019-03-17v41 / 693approvedNo

Problems / suggestions? Please email info AT dbbact DOT org