Experiment ID: 517

Field Description
namethe fecal, oral, and skin microbiota of children with chagas disease treated with benznidazole
qiita11724
sraerp113722
datamd583a64672a48750f490b164fcfc8761c0
mapmd5d8ad4af4edc9f11cc231633156bf9917

Annotations for experiment:

term enrichment score
TermScore
chuquisaca department0.666667
age 5-13 years0.500000
bolivia0.400000
forearm0.400000
arm0.333333
LOWER IN arm0.250000
LOWER IN forearm0.250000
mouth mucosa0.200000
rural community0.181818
LOWER IN mouth mucosa0.181818
LOWER IN mouth0.153846
LOWER IN skin0.142857
LOWER IN feces0.080000
mouth0.076923
child0.060606
skin0.060606
homo sapiens0.008475
feces0.007220
Fraction of dbbact annotations with this term covered by the query
TermScore
chuquisaca department0.500000
forearm0.500000
LOWER IN arm0.500000
LOWER IN forearm0.500000
age 5-13 years0.333333
arm0.333333
bolivia0.250000
LOWER IN mouth mucosa0.200000
LOWER IN mouth0.142857
mouth mucosa0.142857
LOWER IN skin0.125000
rural community0.100000
LOWER IN feces0.052632
mouth0.043478
skin0.033333
child0.031250
homo sapiens0.004255
feces0.003650
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
child1.000000
age 5-13 years1.000000
bolivia1.000000
rural community1.000000
chuquisaca department1.000000
skin0.333333
arm0.333333
forearm0.333333
feces0.333333
mouth mucosa0.333333
mouth0.333333
LOWER IN mouth mucosa0.166667
LOWER IN mouth0.166667
LOWER IN feces0.166667
LOWER IN skin0.166667
LOWER IN arm0.166667
LOWER IN forearm0.166667
Exp. ID User ID Description Date Region Flag Sequences
517amnondominant homo sapiens, child, age 5-13 years, bolivia, rural community, chuquisaca department, mouth mucosa, mouth2019-05-29v4No1 / 0
517amnondominant homo sapiens, child, age 5-13 years, bolivia, rural community, chuquisaca department, skin, arm, forearm2019-05-29v4No1 / 5
517amnondominant feces, homo sapiens, child, age 5-13 years, bolivia, rural community, chuquisaca department2019-05-29v4No1 / 7
517amnoncommon homo sapiens, child, age 5-13 years, bolivia, rural community, chuquisaca department, mouth mucosa, mouth2019-05-29v4No1 / 36
517amnoncommon feces, homo sapiens, child, age 5-13 years, bolivia, rural community, chuquisaca department2019-05-29v4No1 / 105
517amnoncommon homo sapiens, child, age 5-13 years, bolivia, rural community, chuquisaca department, skin, arm, forearm2019-05-29v4No1 / 113
517amnon high in mouth mucosa mouth compared to skin arm forearm in homo sapiens child age 5-13 years bolivia rural community chuquisaca department 2019-05-29v4No1 / 154
517amnon high in mouth mucosa mouth compared to feces in homo sapiens child age 5-13 years bolivia rural community chuquisaca department 2019-05-29v4No1 / 234
517amnon high in feces compared to skin arm forearm in homo sapiens child age 5-13 years bolivia rural community chuquisaca department 2019-05-29v4No1 / 598
517amnon high in feces compared to mouth mucosa mouth in homo sapiens child age 5-13 years bolivia rural community chuquisaca department 2019-05-29v4No1 / 744
517amnon high in skin arm forearm compared to feces in homo sapiens child age 5-13 years bolivia rural community chuquisaca department 2019-05-29v4No1 / 828
517amnon high in skin arm forearm compared to mouth mucosa mouth in homo sapiens child age 5-13 years bolivia rural community chuquisaca department 2019-05-29v4No1 / 1006

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