Experiment ID: 517

Field Description
namethe fecal, oral, and skin microbiota of children with chagas disease treated with benznidazole
sraerp113722
qiita11724
mapmd5d8ad4af4edc9f11cc231633156bf9917
datamd583a64672a48750f490b164fcfc8761c0

Annotations for experiment:

term enrichment score
TermScore
chuquisaca department0.666667
age 5-13 years0.666667
forearm0.400000
bolivia0.400000
arm0.333333
mouth mucosa0.333333
LOWER IN mouth mucosa0.250000
rural community0.250000
LOWER IN forearm0.250000
LOWER IN arm0.250000
LOWER IN skin0.166667
LOWER IN mouth0.153846
child0.111111
LOWER IN feces0.095238
mouth0.086957
skin0.074074
homo sapiens0.013245
feces0.010101
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN mouth mucosa0.500000
forearm0.500000
chuquisaca department0.500000
age 5-13 years0.500000
LOWER IN forearm0.500000
LOWER IN arm0.500000
arm0.333333
mouth mucosa0.333333
bolivia0.250000
LOWER IN skin0.166667
LOWER IN mouth0.142857
rural community0.142857
LOWER IN feces0.066667
child0.058824
mouth0.050000
skin0.041667
homo sapiens0.006667
feces0.005128
Fraction of annotations for the query sequences containing the term
TermScore
chuquisaca department1.000000
rural community1.000000
bolivia1.000000
age 5-13 years1.000000
child1.000000
homo sapiens1.000000
forearm0.333333
arm0.333333
skin0.333333
feces0.333333
mouth mucosa0.333333
mouth0.333333
LOWER IN mouth mucosa0.166667
LOWER IN mouth0.166667
LOWER IN feces0.166667
LOWER IN forearm0.166667
LOWER IN arm0.166667
LOWER IN skin0.166667
Exp. ID User ID Description Date Region Flag Sequences
517amnonhighfreq mouth mucosa, mouth, chuquisaca department, rural community, bolivia, age 5-13 years, child, homo sapiens2019-05-29v4No1 / 8
517amnonhighfreq forearm, arm, skin, chuquisaca department, rural community, bolivia, age 5-13 years, child, homo sapiens2019-05-29v4No1 / 13
517amnonhighfreq chuquisaca department, rural community, bolivia, age 5-13 years, child, homo sapiens, feces2019-05-29v4No1 / 15
517amnoncommon mouth mucosa, mouth, chuquisaca department, rural community, bolivia, age 5-13 years, child, homo sapiens2019-05-29v4No1 / 44
517amnoncommon chuquisaca department, rural community, bolivia, age 5-13 years, child, homo sapiens, feces2019-05-29v4No1 / 113
517amnoncommon forearm, arm, skin, chuquisaca department, rural community, bolivia, age 5-13 years, child, homo sapiens2019-05-29v4No1 / 121
517amnon high in mouth mucosa mouth compared to forearm arm skin in chuquisaca department rural community bolivia age 5-13 years child homo sapiens 2019-05-29v4No1 / 162
517amnon high in mouth mucosa mouth compared to feces in chuquisaca department rural community bolivia age 5-13 years child homo sapiens 2019-05-29v4No1 / 242
517amnon high in feces compared to forearm arm skin in chuquisaca department rural community bolivia age 5-13 years child homo sapiens 2019-05-29v4No1 / 606
517amnon high in feces compared to mouth mucosa mouth in chuquisaca department rural community bolivia age 5-13 years child homo sapiens 2019-05-29v4No1 / 752
517amnon high in forearm arm skin compared to feces in chuquisaca department rural community bolivia age 5-13 years child homo sapiens 2019-05-29v4No1 / 836
517amnon high in forearm arm skin compared to mouth mucosa mouth in chuquisaca department rural community bolivia age 5-13 years child homo sapiens 2019-05-29v4No1 / 1014

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