Experiment ID: 517

Field Description
namethe fecal, oral, and skin microbiota of children with chagas disease treated with benznidazole
qiita11724
sraerp113722
datamd583a64672a48750f490b164fcfc8761c0
mapmd5d8ad4af4edc9f11cc231633156bf9917

Annotations for experiment:

term enrichment score
TermScore
chuquisaca department0.666667
age 5-13 years0.500000
forearm0.400000
bolivia0.400000
arm0.333333
LOWER IN forearm0.250000
LOWER IN arm0.222222
rural community0.166667
mouth mucosa0.166667
LOWER IN mouth mucosa0.133333
mouth0.074074
LOWER IN mouth0.066667
skin0.055556
child0.054054
LOWER IN skin0.051282
homo sapiens0.007353
feces0.006309
LOWER IN feces0.006250
Fraction of dbbact annotations with this term covered by the query
TermScore
forearm0.500000
chuquisaca department0.500000
LOWER IN forearm0.500000
arm0.333333
age 5-13 years0.333333
LOWER IN arm0.333333
bolivia0.250000
LOWER IN mouth mucosa0.111111
mouth mucosa0.111111
rural community0.090909
LOWER IN mouth0.041667
mouth0.041667
skin0.030303
LOWER IN skin0.030303
child0.027778
homo sapiens0.003690
LOWER IN feces0.003185
feces0.003185
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
child1.000000
bolivia1.000000
chuquisaca department1.000000
rural community1.000000
age 5-13 years1.000000
arm0.333333
skin0.333333
forearm0.333333
feces0.333333
mouth mucosa0.333333
mouth0.333333
LOWER IN mouth mucosa0.166667
LOWER IN mouth0.166667
LOWER IN feces0.166667
LOWER IN arm0.166667
LOWER IN skin0.166667
LOWER IN forearm0.166667
Exp. ID User ID Description Date Region Flag Sequences
517amnondominant homo sapiens, mouth mucosa, child, bolivia, chuquisaca department, rural community, age 5-13 years, mouth2019-05-29v4No1 / 8
517amnondominant homo sapiens, arm, skin, forearm, child, bolivia, chuquisaca department, rural community, age 5-13 years2019-05-29v4No1 / 13
517amnondominant feces, homo sapiens, child, bolivia, chuquisaca department, rural community, age 5-13 years2019-05-29v4No1 / 15
517amnoncommon homo sapiens, mouth mucosa, child, bolivia, chuquisaca department, rural community, age 5-13 years, mouth2019-05-29v4No1 / 44
517amnoncommon feces, homo sapiens, child, bolivia, chuquisaca department, rural community, age 5-13 years2019-05-29v4No1 / 113
517amnoncommon homo sapiens, arm, skin, forearm, child, bolivia, chuquisaca department, rural community, age 5-13 years2019-05-29v4No1 / 121
517amnon high in mouth mucosa mouth compared to arm skin forearm in homo sapiens child bolivia chuquisaca department rural community age 5-13 years 2019-05-29v4No1 / 162
517amnon high in mouth mucosa mouth compared to feces in homo sapiens child bolivia chuquisaca department rural community age 5-13 years 2019-05-29v4No1 / 242
517amnon high in feces compared to arm skin forearm in homo sapiens child bolivia chuquisaca department rural community age 5-13 years 2019-05-29v4No1 / 606
517amnon high in feces compared to mouth mucosa mouth in homo sapiens child bolivia chuquisaca department rural community age 5-13 years 2019-05-29v4No1 / 752
517amnon high in arm skin forearm compared to feces in homo sapiens child bolivia chuquisaca department rural community age 5-13 years 2019-05-29v4No1 / 836
517amnon high in arm skin forearm compared to mouth mucosa mouth in homo sapiens child bolivia chuquisaca department rural community age 5-13 years 2019-05-29v4No1 / 1014

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