Experiment ID: 517

Field Description
namethe fecal, oral, and skin microbiota of children with chagas disease treated with benznidazole
qiita11724
sraerp113722
datamd583a64672a48750f490b164fcfc8761c0
mapmd5d8ad4af4edc9f11cc231633156bf9917

Annotations for experiment:

term enrichment score
TermScore
chuquisaca department0.666667
age 5-13 years0.500000
forearm0.400000
bolivia0.400000
arm0.333333
LOWER IN arm0.250000
LOWER IN forearm0.250000
LOWER IN mouth mucosa0.153846
LOWER IN mouth0.153846
mouth mucosa0.153846
LOWER IN skin0.133333
rural community0.117647
mouth0.071429
LOWER IN feces0.060606
skin0.047619
child0.042553
homo sapiens0.006173
feces0.005181
Fraction of dbbact annotations with this term covered by the query
TermScore
forearm0.500000
chuquisaca department0.500000
LOWER IN arm0.500000
LOWER IN forearm0.500000
arm0.333333
age 5-13 years0.333333
bolivia0.250000
LOWER IN mouth mucosa0.142857
LOWER IN mouth0.142857
LOWER IN skin0.111111
mouth mucosa0.100000
rural community0.062500
mouth0.040000
LOWER IN feces0.037037
skin0.025641
child0.021739
homo sapiens0.003096
feces0.002611
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
child1.000000
bolivia1.000000
chuquisaca department1.000000
rural community1.000000
age 5-13 years1.000000
arm0.333333
skin0.333333
forearm0.333333
feces0.333333
mouth mucosa0.333333
mouth0.333333
LOWER IN mouth mucosa0.166667
LOWER IN mouth0.166667
LOWER IN feces0.166667
LOWER IN arm0.166667
LOWER IN skin0.166667
LOWER IN forearm0.166667
Number of experiments associating the term to the sequence
TermScore
arm1.000000
skin1.000000
forearm1.000000
LOWER IN mouth mucosa1.000000
LOWER IN mouth1.000000
homo sapiens1.000000
child1.000000
bolivia1.000000
chuquisaca department1.000000
rural community1.000000
age 5-13 years1.000000
LOWER IN feces1.000000
feces1.000000
LOWER IN arm1.000000
LOWER IN skin1.000000
LOWER IN forearm1.000000
mouth mucosa1.000000
mouth1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
517amnondominant homo sapiens, mouth mucosa, child, bolivia, chuquisaca department, rural community, age 5-13 years, mouth2019-05-29v41 / 8approvedNo
517amnondominant homo sapiens, arm, skin, forearm, child, bolivia, chuquisaca department, rural community, age 5-13 years2019-05-29v41 / 13approvedNo
517amnondominant feces, homo sapiens, child, bolivia, chuquisaca department, rural community, age 5-13 years2019-05-29v41 / 15approvedNo
517amnoncommon homo sapiens, mouth mucosa, child, bolivia, chuquisaca department, rural community, age 5-13 years, mouth2019-05-29v41 / 44approvedNo
517amnoncommon feces, homo sapiens, child, bolivia, chuquisaca department, rural community, age 5-13 years2019-05-29v41 / 113approvedNo
517amnoncommon homo sapiens, arm, skin, forearm, child, bolivia, chuquisaca department, rural community, age 5-13 years2019-05-29v41 / 121approvedNo
517amnon high in mouth mucosa mouth compared to arm skin forearm in homo sapiens child bolivia chuquisaca department rural community age 5-13 years 2019-05-29v41 / 162approvedNo
517amnon high in mouth mucosa mouth compared to feces in homo sapiens child bolivia chuquisaca department rural community age 5-13 years 2019-05-29v41 / 242approvedNo
517amnon high in feces compared to arm skin forearm in homo sapiens child bolivia chuquisaca department rural community age 5-13 years 2019-05-29v41 / 606approvedNo
517amnon high in feces compared to mouth mucosa mouth in homo sapiens child bolivia chuquisaca department rural community age 5-13 years 2019-05-29v41 / 752approvedNo
517amnon high in arm skin forearm compared to feces in homo sapiens child bolivia chuquisaca department rural community age 5-13 years 2019-05-29v41 / 836approvedNo
517amnon high in arm skin forearm compared to mouth mucosa mouth in homo sapiens child bolivia chuquisaca department rural community age 5-13 years 2019-05-29v41 / 1014approvedNo

Problems / suggestions? Please email info AT dbbact DOT org