dbBact

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Experiment ID: 528

Field	Description
name	racioethnic diversity in the dynamics of the vaginal microbiome during pregnancy
sra	prjna326441
datamd5	79934adc795c461b5fed0546476652d6
mapmd5	ab5695ea430ebafb56751c572e64cd79

Annotations for experiment:

term enrichment score

Term	Score
LOWER IN african	0.333333
african	0.333333
caucasian	0.250000
LOWER IN african american	0.250000
african american	0.250000
LOWER IN caucasian	0.250000
vagina	0.166667
pregnancy	0.153846
female	0.031250
united states of america	0.008065
homo sapiens	0.007353

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN african	0.500000
african	0.500000
caucasian	0.250000
LOWER IN african american	0.250000
african american	0.250000
LOWER IN caucasian	0.250000
vagina	0.090909
pregnancy	0.083333
female	0.015873
united states of america	0.004049
homo sapiens	0.003690

Fraction of annotations for the query sequences containing the term

Term	Score
homo sapiens	1.000000
united states of america	1.000000
female	1.000000
pregnancy	1.000000
vagina	1.000000
caucasian	0.250000
LOWER IN african american	0.250000
LOWER IN african	0.250000
african american	0.250000
african	0.250000
LOWER IN caucasian	0.250000

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
528	amnon	common homo sapiens, united states of america, female, pregnancy, vagina	2019-07-14	v1	No	1 / 5
528	amnon	dominant homo sapiens, united states of america, female, pregnancy, vagina	2019-07-14	v1	No	1 / 16
528	amnon	high in african american african compared to caucasian in homo sapiens united states of america female pregnancy vagina	2019-07-14	v1	No	1 / 34
528	amnon	high in caucasian compared to african american african in homo sapiens united states of america female pregnancy vagina	2019-07-14	v1	No	1 / 38

Problems / suggestions? Please email info AT dbbact DOT org