Experiment ID: 535

Field Description
namedeciphering the complex interplay between microbiota, hpv, inflammation and cancer through cervicovaginal metabolic profiling
doihttps://doi.org/10.1016/j.ebiom.2019.04.028
sraprjna518153
mapmd514ecb5f6aca60ae26937360b66313a71
datamd5664052bd3b6160d437317463fda9869e

Annotations for experiment:

term enrichment score
TermScore
phoenix0.666667
dysplasia of cervix0.428571
state of arizona0.400000
cervical carcinoma0.333333
invasive cervical carcinoma0.333333
invasive carcinoma0.333333
vagina0.285714
LOWER IN dysplasia of cervix0.200000
female0.060606
adult0.026667
control0.016575
LOWER IN control0.016000
homo sapiens0.013245
united states of america0.010989
Fraction of dbbact annotations with this term covered by the query
TermScore
cervical carcinoma0.500000
invasive cervical carcinoma0.500000
invasive carcinoma0.500000
phoenix0.500000
LOWER IN dysplasia of cervix0.500000
dysplasia of cervix0.500000
state of arizona0.250000
vagina0.166667
female0.031250
adult0.013514
LOWER IN control0.008547
control0.008475
homo sapiens0.006667
united states of america0.005525
Fraction of annotations for the query sequences containing the term
TermScore
state of arizona1.000000
phoenix1.000000
united states of america1.000000
adult1.000000
female1.000000
vagina1.000000
homo sapiens1.000000
control0.375000
dysplasia of cervix0.375000
cervical carcinoma0.250000
invasive cervical carcinoma0.250000
invasive carcinoma0.250000
LOWER IN dysplasia of cervix0.125000
LOWER IN control0.125000
Exp. ID User ID Description Date Region Flag Sequences
535amnoncommon in healthy adult vaginal samples (common control, state of arizona, phoenix, united states of america, adult, female, vagina, homo sapiens)2019-07-25v4No1 / 7
535amnon high in dysplasia of cervix compared to control in state of arizona phoenix united states of america adult female vagina homo sapiens 2019-07-25v4No1 / 9
535amnonhcommon in adult vaginal samples with cervical dysplasia (common dysplasia of cervix, state of arizona, phoenix, united states of america, adult, female, vagina, homo sapiens)2019-07-25v4No1 / 11
535amnoncommon in adult vaginal samples with ICC (common cervical carcinoma, invasive cervical carcinoma, invasive carcinoma, state of arizona, phoenix, united states of america, adult, female, vagina, homo sapiens)2019-07-25v4No1 / 11
535amnonhigh freq. in healthy adult vaginal samples (highfreq control, state of arizona, phoenix, united states of america, adult, female, vagina, homo sapiens)2019-07-25v4No1 / 11
535amnon high in control compared to dysplasia of cervix in state of arizona phoenix united states of america adult female vagina homo sapiens 2019-07-25v4No1 / 16
535amnonhigh freq. in adult vaginal samples with cervical dysplasia (highfreq dysplasia of cervix, state of arizona, phoenix, united states of america, adult, female, vagina, homo sapiens)2019-07-25v4No1 / 16
535amnonhigh freq. in adult vaginal samples with ICC (highfreq cervical carcinoma, invasive cervical carcinoma, invasive carcinoma, state of arizona, phoenix, united states of america, adult, female, vagina, homo sapiens)2019-07-25v4No1 / 20

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