Experiment ID: 542

Field Description
namemicrobiome profiles of ligature-induced periodontitis in nonhuman primates across the lifespan
sraprjna516659
doidoi:10.1128/iai.00067-19
datamd506eb0275f1fcff0a0aeb44c1410bf30f
mapmd5a965eab1012d728a618c48a9f2a002f3

Annotations for experiment:

term enrichment score
TermScore
puerto rico0.666667
age 12-23 years0.500000
age 1-7 years0.400000
LOWER IN induced periodontitis0.285714
induced periodontitis0.285714
macaca mulatta0.285714
LOWER IN periodontitis0.222222
periodontitis0.222222
LOWER IN age 12-23 years0.166667
LOWER IN age 1-7 years0.153846
subgingival plaque0.133333
monkey0.133333
dentition0.083333
child0.052632
LOWER IN child0.043478
research facility0.013514
adult0.011429
LOWER IN adult0.010929
control0.010526
LOWER IN control0.010526
Fraction of dbbact annotations with this term covered by the query
TermScore
age 12-23 years0.500000
puerto rico0.500000
LOWER IN induced periodontitis0.500000
LOWER IN age 12-23 years0.500000
induced periodontitis0.500000
LOWER IN age 1-7 years0.333333
age 1-7 years0.333333
LOWER IN periodontitis0.250000
periodontitis0.250000
macaca mulatta0.166667
subgingival plaque0.071429
monkey0.071429
dentition0.043478
LOWER IN child0.027778
child0.027778
research facility0.006803
adult0.005780
LOWER IN adult0.005780
control0.005405
LOWER IN control0.005405
Fraction of annotations for the query sequences containing the term
TermScore
research facility1.000000
dentition1.000000
macaca mulatta1.000000
puerto rico1.000000
subgingival plaque1.000000
monkey1.000000
adult0.500000
age 12-23 years0.500000
child0.500000
age 1-7 years0.500000
control0.200000
LOWER IN induced periodontitis0.200000
LOWER IN periodontitis0.200000
induced periodontitis0.200000
periodontitis0.200000
LOWER IN control0.200000
LOWER IN child0.100000
LOWER IN age 1-7 years0.100000
LOWER IN adult0.100000
LOWER IN age 12-23 years0.100000
Exp. ID User ID Description Date Region Flag Sequences
542amnonhigher in ligature induced periodontitis compared to control timepoints ( high in induced periodontitis periodontitis compared to control in research facility dentition adult macaca mulatta puerto rico subgingival plaque monkey age 12-23 years )2019-08-01v4No1 / 11
542amnonhigher in ligature induced periodontitis compared to control timepoints ( high in induced periodontitis periodontitis compared to control in research facility dentition macaca mulatta child puerto rico subgingival plaque monkey age 1-7 years )2019-08-01v4No1 / 15
542amnonlower in ligature induced periodontitis compared to control timepoints ( high in control compared to induced periodontitis periodontitis in research facility dentition macaca mulatta child puerto rico subgingival plaque monkey age 1-7 years )2019-08-01v4No1 / 17
542amnondominant research facility, dentition, macaca mulatta, child, puerto rico, subgingival plaque, monkey, age 1-7 years2019-08-01v4No1 / 19
542amnondominant research facility, dentition, adult, macaca mulatta, puerto rico, subgingival plaque, monkey, age 12-23 years2019-08-01v4No1 / 19
542amnon high in child age 1-7 years compared to adult age 12-23 years in research facility dentition macaca mulatta puerto rico subgingival plaque monkey 2019-08-01v4No1 / 23
542amnonlower in ligature induced periodontitis compared to control timepoints ( high in control compared to induced periodontitis periodontitis in research facility dentition adult macaca mulatta puerto rico subgingival plaque monkey age 12-23 years )2019-08-01v4No1 / 33
542amnoncommon research facility, dentition, macaca mulatta, child, puerto rico, subgingival plaque, monkey, age 1-7 years2019-08-01v4No1 / 41
542amnoncommon research facility, dentition, adult, macaca mulatta, puerto rico, subgingival plaque, monkey, age 12-23 years2019-08-01v4No1 / 208
542amnon high in adult age 12-23 years compared to child age 1-7 years in research facility dentition macaca mulatta puerto rico subgingival plaque monkey 2019-08-01v4No1 / 337

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