Experiment ID: 542

Field Description
namemicrobiome profiles of ligature-induced periodontitis in nonhuman primates across the lifespan
sraprjna516659
doidoi:10.1128/iai.00067-19
datamd506eb0275f1fcff0a0aeb44c1410bf30f
mapmd5a965eab1012d728a618c48a9f2a002f3

Annotations for experiment:

term enrichment score
TermScore
macaca mulatta0.500000
puerto rico0.500000
age 12-23 years0.500000
age 1-7 years0.500000
LOWER IN induced periodontitis0.285714
induced periodontitis0.285714
monkey0.222222
subgingival plaque0.181818
LOWER IN age 1-7 years0.166667
LOWER IN age 12-23 years0.166667
LOWER IN periodontitis0.142857
periodontitis0.142857
dentition0.125000
LOWER IN child0.125000
child0.090909
LOWER IN adult0.074074
adult0.024691
research facility0.020408
LOWER IN control0.015625
control0.015504
Fraction of dbbact annotations with this term covered by the query
TermScore
age 12-23 years0.500000
LOWER IN age 1-7 years0.500000
age 1-7 years0.500000
LOWER IN induced periodontitis0.500000
LOWER IN age 12-23 years0.500000
induced periodontitis0.500000
macaca mulatta0.333333
puerto rico0.333333
LOWER IN child0.166667
monkey0.125000
LOWER IN periodontitis0.111111
periodontitis0.111111
subgingival plaque0.100000
dentition0.066667
LOWER IN adult0.058824
child0.050000
adult0.012658
research facility0.010309
LOWER IN control0.008130
control0.008065
Fraction of annotations for the query sequences containing the term
TermScore
subgingival plaque1.000000
dentition1.000000
monkey1.000000
macaca mulatta1.000000
research facility1.000000
puerto rico1.000000
adult0.500000
age 12-23 years0.500000
child0.500000
age 1-7 years0.500000
control0.200000
LOWER IN induced periodontitis0.200000
LOWER IN periodontitis0.200000
induced periodontitis0.200000
LOWER IN control0.200000
periodontitis0.200000
LOWER IN child0.100000
LOWER IN age 1-7 years0.100000
LOWER IN adult0.100000
LOWER IN age 12-23 years0.100000
Exp. ID User ID Description Date Region Flag Sequences
542amnonhigher in ligature induced periodontitis compared to control timepoints ( high in induced periodontitis periodontitis compared to control in subgingival plaque dentition monkey macaca mulatta research facility puerto rico adult age 12-23 years )2019-08-01v4No1 / 11
542amnonhigher in ligature induced periodontitis compared to control timepoints ( high in induced periodontitis periodontitis compared to control in subgingival plaque dentition monkey macaca mulatta research facility puerto rico child age 1-7 years )2019-08-01v4No1 / 15
542amnonlower in ligature induced periodontitis compared to control timepoints ( high in control compared to induced periodontitis periodontitis in subgingival plaque dentition monkey macaca mulatta research facility puerto rico child age 1-7 years )2019-08-01v4No1 / 17
542amnonhighfreq subgingival plaque, dentition, monkey, macaca mulatta, research facility, puerto rico, age 12-23 years, adult2019-08-01v4No1 / 19
542amnonhighfreq subgingival plaque, dentition, monkey, macaca mulatta, research facility, puerto rico, child, age 1-7 years2019-08-01v4No1 / 19
542amnon high in child age 1-7 years compared to adult age 12-23 years in subgingival plaque dentition monkey macaca mulatta research facility puerto rico 2019-08-01v4No1 / 23
542amnonlower in ligature induced periodontitis compared to control timepoints ( high in control compared to induced periodontitis periodontitis in subgingival plaque dentition monkey macaca mulatta research facility puerto rico adult age 12-23 years )2019-08-01v4No1 / 33
542amnoncommon subgingival plaque, dentition, monkey, macaca mulatta, research facility, puerto rico, child, age 1-7 years2019-08-01v4No1 / 41
542amnoncommon subgingival plaque, dentition, monkey, macaca mulatta, research facility, puerto rico, age 12-23 years, adult2019-08-01v4No1 / 208
542amnon high in adult age 12-23 years compared to child age 1-7 years in subgingival plaque dentition monkey macaca mulatta research facility puerto rico 2019-08-01v4No1 / 337

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