Experiment ID: 542

Field Description
namemicrobiome profiles of ligature-induced periodontitis in nonhuman primates across the lifespan
sraprjna516659
doidoi:10.1128/iai.00067-19
datamd506eb0275f1fcff0a0aeb44c1410bf30f
mapmd5a965eab1012d728a618c48a9f2a002f3

Annotations for experiment:

term enrichment score
TermScore
puerto rico0.500000
age 12-23 years0.500000
macaca mulatta0.400000
age 1-7 years0.400000
LOWER IN induced periodontitis0.285714
induced periodontitis0.285714
monkey0.222222
subgingival plaque0.181818
LOWER IN age 12-23 years0.166667
LOWER IN age 1-7 years0.153846
LOWER IN periodontitis0.142857
periodontitis0.142857
dentition0.117647
LOWER IN child0.117647
child0.080000
LOWER IN adult0.071429
adult0.020000
research facility0.018349
LOWER IN control0.013793
control0.013699
Fraction of dbbact annotations with this term covered by the query
TermScore
age 12-23 years0.500000
LOWER IN induced periodontitis0.500000
LOWER IN age 12-23 years0.500000
induced periodontitis0.500000
puerto rico0.333333
LOWER IN age 1-7 years0.333333
age 1-7 years0.333333
macaca mulatta0.250000
LOWER IN child0.142857
monkey0.125000
LOWER IN periodontitis0.111111
periodontitis0.111111
subgingival plaque0.100000
dentition0.062500
LOWER IN adult0.055556
child0.043478
adult0.010204
research facility0.009259
LOWER IN control0.007143
control0.007092
Fraction of annotations for the query sequences containing the term
TermScore
subgingival plaque1.000000
dentition1.000000
monkey1.000000
macaca mulatta1.000000
research facility1.000000
puerto rico1.000000
adult0.500000
age 12-23 years0.500000
child0.500000
age 1-7 years0.500000
control0.200000
LOWER IN induced periodontitis0.200000
LOWER IN periodontitis0.200000
induced periodontitis0.200000
LOWER IN control0.200000
periodontitis0.200000
LOWER IN child0.100000
LOWER IN age 1-7 years0.100000
LOWER IN adult0.100000
LOWER IN age 12-23 years0.100000
Exp. ID User ID Description Date Region Flag Sequences
542amnonhigher in ligature induced periodontitis compared to control timepoints ( high in induced periodontitis periodontitis compared to control in subgingival plaque dentition monkey macaca mulatta research facility puerto rico adult age 12-23 years )2019-08-01v4No1 / 11
542amnonhigher in ligature induced periodontitis compared to control timepoints ( high in induced periodontitis periodontitis compared to control in subgingival plaque dentition monkey macaca mulatta research facility puerto rico child age 1-7 years )2019-08-01v4No1 / 15
542amnonlower in ligature induced periodontitis compared to control timepoints ( high in control compared to induced periodontitis periodontitis in subgingival plaque dentition monkey macaca mulatta research facility puerto rico child age 1-7 years )2019-08-01v4No1 / 17
542amnondominant subgingival plaque, dentition, monkey, macaca mulatta, research facility, puerto rico, age 12-23 years, adult2019-08-01v4No1 / 19
542amnondominant subgingival plaque, dentition, monkey, macaca mulatta, research facility, puerto rico, child, age 1-7 years2019-08-01v4No1 / 19
542amnon high in child age 1-7 years compared to adult age 12-23 years in subgingival plaque dentition monkey macaca mulatta research facility puerto rico 2019-08-01v4No1 / 23
542amnonlower in ligature induced periodontitis compared to control timepoints ( high in control compared to induced periodontitis periodontitis in subgingival plaque dentition monkey macaca mulatta research facility puerto rico adult age 12-23 years )2019-08-01v4No1 / 33
542amnoncommon subgingival plaque, dentition, monkey, macaca mulatta, research facility, puerto rico, child, age 1-7 years2019-08-01v4No1 / 41
542amnoncommon subgingival plaque, dentition, monkey, macaca mulatta, research facility, puerto rico, age 12-23 years, adult2019-08-01v4No1 / 208
542amnon high in adult age 12-23 years compared to child age 1-7 years in subgingival plaque dentition monkey macaca mulatta research facility puerto rico 2019-08-01v4No1 / 337

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