Experiment ID: 567

Field Description
nameanterior nares diversity and pathobionts represent sinus microbiome in chronic rhinosinusitis
sraprjeb30316
sraprjeb23057
doihttps://doi.org/10.1128/msphere.00532-19
datamd591e4a98d96fec607471b3bdb02f5ba9c
mapmd5b38f0a792fb42f7df3a5339a10763bc8

Annotations for experiment:

term enrichment score
TermScore
anterior naris0.454545
LOWER IN chronic rhinosinusitis0.250000
maxillary sinus0.250000
ethmoid sinus0.250000
chronic rhinosinusitis0.250000
LOWER IN sinusitis0.222222
sinusitis0.200000
belgium0.200000
nasopharynx0.161290
LOWER IN anterior naris0.142857
LOWER IN nasopharynx0.133333
pair of nares0.121951
LOWER IN pair of nares0.111111
LOWER IN control0.009259
control0.009050
adult0.008547
homo sapiens0.005479
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN chronic rhinosinusitis0.500000
anterior naris0.500000
LOWER IN anterior naris0.500000
maxillary sinus0.500000
ethmoid sinus0.500000
chronic rhinosinusitis0.500000
LOWER IN sinusitis0.333333
LOWER IN nasopharynx0.333333
sinusitis0.250000
LOWER IN pair of nares0.166667
belgium0.111111
nasopharynx0.100000
pair of nares0.071429
LOWER IN control0.004762
control0.004651
adult0.004292
homo sapiens0.002747
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
adult1.000000
belgium1.000000
pair of nares0.416667
anterior naris0.416667
nasopharynx0.416667
control0.166667
LOWER IN sinusitis0.166667
LOWER IN chronic rhinosinusitis0.166667
maxillary sinus0.166667
ethmoid sinus0.166667
chronic rhinosinusitis0.166667
sinusitis0.166667
LOWER IN control0.166667
LOWER IN nasopharynx0.083333
LOWER IN pair of nares0.083333
LOWER IN anterior naris0.083333
Number of experiments associating the term to the sequence
TermScore
control1.000000
LOWER IN sinusitis1.000000
LOWER IN chronic rhinosinusitis1.000000
homo sapiens1.000000
pair of nares1.000000
adult1.000000
belgium1.000000
anterior naris1.000000
LOWER IN nasopharynx1.000000
nasopharynx1.000000
LOWER IN pair of nares1.000000
LOWER IN anterior naris1.000000
maxillary sinus1.000000
ethmoid sinus1.000000
chronic rhinosinusitis1.000000
sinusitis1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
567amnon high in chronic rhinosinusitis sinusitis compared to control in homo sapiens pair of nares adult belgium anterior naris 2019-12-05v41 / 3approvedNo
567amnoncommon homo sapiens, nasopharynx, adult, belgium2019-12-05v41 / 11approvedNo
567amnoncommon homo sapiens, adult, belgium, maxillary sinus, ethmoid sinus2019-12-05v41 / 12approvedNo
567amnondominant homo sapiens, pair of nares, adult, belgium, anterior naris2019-12-05v41 / 13approvedNo
567amnondominant homo sapiens, nasopharynx, adult, belgium2019-12-05v41 / 16approvedNo
567amnon high in chronic rhinosinusitis sinusitis compared to control in homo sapiens nasopharynx adult belgium 2019-12-05v41 / 18approvedNo
567amnondominant homo sapiens, adult, belgium, maxillary sinus, ethmoid sinus2019-12-05v41 / 19approvedNo
567amnoncommon homo sapiens, pair of nares, adult, belgium, anterior naris2019-12-05v41 / 21approvedNo
567amnon high in nasopharynx compared to pair of nares anterior naris in homo sapiens adult belgium 2019-12-05v41 / 38approvedNo
567amnon high in control compared to sinusitis chronic rhinosinusitis in homo sapiens nasopharynx adult belgium 2019-12-05v41 / 114approvedNo
567amnon high in pair of nares anterior naris compared to nasopharynx in homo sapiens adult belgium 2019-12-05v41 / 186approvedNo
567amnon high in control compared to sinusitis chronic rhinosinusitis in homo sapiens pair of nares adult belgium anterior naris 2019-12-05v41 / 191approvedNo

Problems / suggestions? Please visit the dbBact forum