dbBact

Field	Description
name	prokaryotic diversity in mangrove sediments across southeastern china fundamentally differs from that in other biomes
sra	prjna475455
doi	https://doi.org/10.1128/msystems.00442-19
datamd5	7cbf999aea42fa523408615c5b370f05
mapmd5	5e4b7659d00c2eab5d3eab0ac0401ea8

term enrichment score

Term	Score
kandelia candel	0.357143
mangrove swamp	0.333333
guangdong province	0.320000
spartina alterniflora	0.275862
hainan autonomous prefecture	0.275862
futian national nature reserve	0.272727
mudflat	0.272727
mangrove	0.244898
ximendao national marine reserve	0.235294
shenzhen futian national nature reserve	0.235294
leizhou nature reserve	0.235294
dongzhaigang national nature reserve	0.235294
danzhou xinyinggang nature reserve	0.235294
zhejiang province	0.158730
rhizophora stylosa	0.133333
marine sediment	0.100000
depth (soil) 0-20cm	0.095238
soil	0.019608
china	0.009615

Fraction of dbbact annotations with this term covered by the query

Term	Score
ximendao national marine reserve	0.500000
shenzhen futian national nature reserve	0.500000
leizhou nature reserve	0.500000
dongzhaigang national nature reserve	0.500000
rhizophora stylosa	0.500000
danzhou xinyinggang nature reserve	0.500000
futian national nature reserve	0.333333
guangdong province	0.333333
mudflat	0.333333
kandelia candel	0.333333
spartina alterniflora	0.250000
hainan autonomous prefecture	0.250000
mangrove swamp	0.200000
mangrove	0.166667
zhejiang province	0.100000
marine sediment	0.052632
depth (soil) 0-20cm	0.050000
soil	0.009901
china	0.004831

Fraction of annotations for the query sequences containing the term

Term	Score
mangrove swamp	1.000000
soil	1.000000
marine sediment	1.000000
china	1.000000
depth (soil) 0-20cm	1.000000
mangrove	0.461538
zhejiang province	0.384615
kandelia candel	0.384615
spartina alterniflora	0.307692
guangdong province	0.307692
hainan autonomous prefecture	0.307692
futian national nature reserve	0.230769
mudflat	0.230769
ximendao national marine reserve	0.153846
shenzhen futian national nature reserve	0.153846
leizhou nature reserve	0.153846
dongzhaigang national nature reserve	0.153846
danzhou xinyinggang nature reserve	0.153846
rhizophora stylosa	0.076923

Number of experiments associating the term to the sequence

Term	Score
mangrove swamp	1.000000
soil	1.000000
marine sediment	1.000000
spartina alterniflora	1.000000
zhejiang province	1.000000
china	1.000000
futian national nature reserve	1.000000
depth (soil) 0-20cm	1.000000
ximendao national marine reserve	1.000000
guangdong province	1.000000
mudflat	1.000000
shenzhen futian national nature reserve	1.000000
mangrove	1.000000
kandelia candel	1.000000
leizhou nature reserve	1.000000
hainan autonomous prefecture	1.000000
dongzhaigang national nature reserve	1.000000
rhizophora stylosa	1.000000
danzhou xinyinggang nature reserve	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
571	amnon	dominant mangrove swamp, soil, marine sediment, guangdong province, mudflat, china, shenzhen futian national nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 1	approved	No
571	amnon	dominant mangrove swamp, soil, marine sediment, spartina alterniflora, zhejiang province, china, futian national nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 2	approved	No
571	amnon	dominant mangrove swamp, soil, marine sediment, guangdong province, mangrove, china, kandelia candel, shenzhen futian national nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 2	approved	No
571	amnon	dominant mangrove swamp, soil, marine sediment, mangrove, china, hainan autonomous prefecture, rhizophora stylosa, danzhou xinyinggang nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 3	approved	No
571	amnon	dominant mangrove swamp, soil, marine sediment, guangdong province, mangrove, china, kandelia candel, leizhou nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 3	approved	No
571	amnon	dominant mangrove swamp, soil, marine sediment, spartina alterniflora, zhejiang province, china, ximendao national marine reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 3	approved	No
571	amnon	dominant mangrove swamp, soil, marine sediment, spartina alterniflora, guangdong province, china, leizhou nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 4	approved	No
571	amnon	dominant mangrove swamp, soil, marine sediment, zhejiang province, mudflat, china, futian national nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 4	approved	No
571	amnon	dominant mangrove swamp, soil, marine sediment, zhejiang province, mangrove, china, kandelia candel, futian national nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 4	approved	No
571	amnon	dominant mangrove swamp, soil, marine sediment, mangrove, china, hainan autonomous prefecture, kandelia candel, dongzhaigang national nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 4	approved	No
571	amnon	dominant mangrove swamp, soil, marine sediment, mudflat, china, hainan autonomous prefecture, dongzhaigang national nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 5	approved	No
571	amnon	dominant mangrove swamp, soil, marine sediment, zhejiang province, mangrove, china, kandelia candel, ximendao national marine reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 6	approved	No
571	amnon	dominant mangrove swamp, soil, marine sediment, spartina alterniflora, china, hainan autonomous prefecture, danzhou xinyinggang nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 7	approved	No
571	amnon	common mangrove swamp, soil, marine sediment, spartina alterniflora, china, hainan autonomous prefecture, danzhou xinyinggang nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 1169	approved	No
571	amnon	common mangrove swamp, soil, marine sediment, mangrove, china, hainan autonomous prefecture, rhizophora stylosa, danzhou xinyinggang nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 1210	approved	No
571	amnon	common mangrove swamp, soil, marine sediment, mangrove, china, hainan autonomous prefecture, kandelia candel, dongzhaigang national nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 1351	approved	No
571	amnon	common mangrove swamp, soil, marine sediment, mudflat, china, hainan autonomous prefecture, dongzhaigang national nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 1422	approved	No
571	amnon	common mangrove swamp, soil, marine sediment, zhejiang province, mangrove, china, kandelia candel, futian national nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 1435	approved	No
571	amnon	common mangrove swamp, soil, marine sediment, spartina alterniflora, guangdong province, china, leizhou nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 1437	approved	No
571	amnon	common mangrove swamp, soil, marine sediment, guangdong province, mangrove, china, kandelia candel, leizhou nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 1523	approved	No
571	amnon	common mangrove swamp, soil, marine sediment, zhejiang province, mudflat, china, futian national nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 1587	approved	No
571	amnon	common mangrove swamp, soil, marine sediment, guangdong province, mangrove, china, kandelia candel, shenzhen futian national nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 1593	approved	No
571	amnon	common mangrove swamp, soil, marine sediment, zhejiang province, mangrove, china, kandelia candel, ximendao national marine reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 1636	approved	No
571	amnon	common mangrove swamp, soil, marine sediment, guangdong province, mudflat, china, shenzhen futian national nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 1649	approved	No
571	amnon	common mangrove swamp, soil, marine sediment, spartina alterniflora, zhejiang province, china, ximendao national marine reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 1668	approved	No
571	amnon	common mangrove swamp, soil, marine sediment, spartina alterniflora, zhejiang province, china, futian national nature reserve, depth (soil) 0-20cm	2019-12-16	v4	1 / 1747	approved	No

Experiment ID: 571

Annotations for experiment: