Experiment ID: 589

Field Description
namefiber-mediated nourishment of gut microbiota protects against diet-induced obesity by restoring il-22-mediated colonic health
sraprjeb23793
doihttps://doi.org/10.1016/j.chom.2017.11.003
datamd57ae581305fb91bb0925fcca0489390aa
mapmd588d7627fa8d91684d3c1da74ed64847e

Annotations for experiment:

term enrichment score
TermScore
high fat diet + inulin0.375000
low fat diet0.363636
jackson laboratories0.250000
LOWER IN low fat diet0.250000
state of georgia0.222222
LOWER IN high fat diet + inulin0.166667
high fat diet0.130435
mouse chow0.114286
LOWER IN mouse chow0.100000
c57bl/60.095238
LOWER IN high fat diet0.090909
mouse0.032258
mus musculus0.029412
research facility0.012270
united states of america0.007692
feces0.005780
Fraction of dbbact annotations with this term covered by the query
TermScore
high fat diet + inulin0.500000
LOWER IN high fat diet + inulin0.500000
low fat diet0.333333
LOWER IN low fat diet0.333333
jackson laboratories0.142857
state of georgia0.125000
high fat diet0.083333
LOWER IN high fat diet0.083333
mouse chow0.066667
LOWER IN mouse chow0.066667
c57bl/60.050000
mouse0.016393
mus musculus0.014925
research facility0.006173
united states of america0.003861
feces0.002899
Fraction of annotations for the query sequences containing the term
TermScore
mouse1.000000
mus musculus1.000000
c57bl/61.000000
research facility1.000000
feces1.000000
jackson laboratories1.000000
united states of america1.000000
state of georgia1.000000
mouse chow0.400000
low fat diet0.400000
high fat diet0.300000
high fat diet + inulin0.300000
LOWER IN mouse chow0.200000
LOWER IN low fat diet0.200000
LOWER IN high fat diet0.100000
LOWER IN high fat diet + inulin0.100000
Number of experiments associating the term to the sequence
TermScore
mouse1.000000
mus musculus1.000000
c57bl/61.000000
research facility1.000000
feces1.000000
jackson laboratories1.000000
united states of america1.000000
state of georgia1.000000
high fat diet1.000000
mouse chow1.000000
low fat diet1.000000
high fat diet + inulin1.000000
LOWER IN mouse chow1.000000
LOWER IN low fat diet1.000000
LOWER IN high fat diet1.000000
LOWER IN high fat diet + inulin1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
589amnondominant mouse, mus musculus, c57bl/6, research facility, feces, jackson laboratories, united states of america, state of georgia, high fat diet + inulin2020-02-10v41 / 12approvedNo
589amnondominant mouse, mus musculus, c57bl/6, research facility, feces, jackson laboratories, mouse chow, low fat diet, united states of america, state of georgia2020-02-10v41 / 16approvedNo
589amnondominant in high fat diet supplemented with cellulose in mice feces (dominant mouse, mus musculus, c57bl/6, research facility, feces, jackson laboratories, united states of america, state of georgia, high fat diet)2020-02-10v41 / 17approvedNo
589amnon high in high fat diet + inulin compared to low fat diet mouse chow in mouse mus musculus c57bl/6 research facility feces jackson laboratories united states of america state of georgia 2020-02-10v41 / 19approvedNo
589amnon high in mouse chow low fat diet compared to high fat diet + inulin in mouse mus musculus c57bl/6 research facility feces jackson laboratories united states of america state of georgia 2020-02-10v41 / 51approvedNo
589amnon high in mouse chow low fat diet compared to high fat diet in mouse mus musculus c57bl/6 research facility feces jackson laboratories united states of america state of georgia 2020-02-10v41 / 74approvedNo
589amnon high in high fat diet compared to mouse chow low fat diet in mouse mus musculus c57bl/6 research facility feces jackson laboratories united states of america state of georgia 2020-02-10v41 / 75approvedNo
589amnoncommon mouse, mus musculus, c57bl/6, research facility, feces, jackson laboratories, united states of america, state of georgia, high fat diet + inulin2020-02-10v41 / 78approvedNo
589amnoncommon mouse, mus musculus, c57bl/6, research facility, feces, jackson laboratories, mouse chow, low fat diet, united states of america, state of georgia2020-02-10v41 / 151approvedNo
589amnoncommon in high fat diet supplemented with cellulose in mice feces (common mouse, mus musculus, c57bl/6, research facility, feces, jackson laboratories, united states of america, state of georgia, high fat diet)2020-02-10v41 / 172approvedNo

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