Experiment ID: 59

Field Description
namestrain diversity and host specificity in a specialized gut symbiont of honeybees and bumblebees
srasrp071118
datamd5da3f4d2151d8220006667f471908d7fd
mapmd53a82ebefdbe7074f8c440414c98f9b17

Annotations for experiment:

term enrichment score
TermScore
apis mellifera0.208333
trigona hyalinata0.108108
apis dorsata0.108108
trigona spinipes0.108108
sundatrigona moorei0.108108
centris atripes0.108108
geniotrigona thoracica0.108108
apis florea0.108108
apis andreniformis0.108108
apis cerana0.108108
paratrigona lineata0.108108
heterotrigona itama0.108108
tetragonula fuscobalteata0.108108
bombus bifarius0.108108
bombus pennsylvanicus0.102564
austin0.058824
LOWER IN malaysia0.055556
malaysia0.055556
LOWER IN seoul0.054054
seoul0.054054
digestive system0.051241
state of texas0.048780
pathogen0.043478
LOWER IN australia0.035714
australia0.035714
LOWER IN china0.010610
united states of america0.007590
Fraction of dbbact annotations with this term covered by the query
TermScore
austin1.000000
trigona hyalinata0.500000
apis dorsata0.500000
trigona spinipes0.500000
sundatrigona moorei0.500000
centris atripes0.500000
geniotrigona thoracica0.500000
apis florea0.500000
apis andreniformis0.500000
apis cerana0.500000
paratrigona lineata0.500000
heterotrigona itama0.500000
tetragonula fuscobalteata0.500000
bombus bifarius0.500000
LOWER IN malaysia0.333333
apis mellifera0.333333
bombus pennsylvanicus0.333333
malaysia0.333333
LOWER IN seoul0.250000
seoul0.250000
state of texas0.125000
pathogen0.076923
LOWER IN australia0.043478
australia0.043478
digestive system0.026316
LOWER IN china0.005814
united states of america0.004049
Fraction of annotations for the query sequences containing the term
TermScore
digestive system0.969697
apis mellifera0.151515
trigona hyalinata0.060606
apis dorsata0.060606
trigona spinipes0.060606
united states of america0.060606
LOWER IN china0.060606
sundatrigona moorei0.060606
centris atripes0.060606
geniotrigona thoracica0.060606
bombus pennsylvanicus0.060606
apis florea0.060606
apis andreniformis0.060606
apis cerana0.060606
paratrigona lineata0.060606
heterotrigona itama0.060606
tetragonula fuscobalteata0.060606
bombus bifarius0.060606
austin0.030303
LOWER IN australia0.030303
LOWER IN malaysia0.030303
LOWER IN seoul0.030303
australia0.030303
state of texas0.030303
malaysia0.030303
seoul0.030303
pathogen0.030303
Exp. ID User ID Description Date Region Flag Sequences
59amnon high in united states of america australia state of texas malaysia seoul compared to china in digestive system apis mellifera 2017-02-02v4No1 / 1
59amnoncandidate pathogen (Melissococcus plutonius). Causes European Foulbrood of honeybees (other pathogen, apis mellifera)2017-02-02v4No1 / 1
59amnondominant digestive system, bombus bifarius2017-02-03v4No1 / 6
59amnoncommon digestive system, bombus bifarius2017-02-03v4No1 / 6
59amnondominant digestive system, tetragonula fuscobalteata2017-02-02v4No1 / 7
59amnoncommon digestive system, tetragonula fuscobalteata2017-02-02v4No1 / 8
59amnondominant digestive system, geniotrigona thoracica2017-02-03v4No1 / 9
59amnoncommon digestive system, paratrigona lineata2017-02-03v4No1 / 10
59amnoncommon digestive system, apis cerana2017-02-02v4No1 / 10
59amnondominant digestive system, centris atripes2017-02-03v4No1 / 11
59amnoncommon digestive system, heterotrigona itama2017-02-03v4No1 / 11
59amnon high in compared to in digestive system bombus pennsylvanicus 2017-02-02v4No1 / 11
59amnondominant digestive system, paratrigona lineata2017-02-03v4No1 / 12
59amnondominant digestive system, heterotrigona itama2017-02-03v4No1 / 12
59amnondominant digestive system, sundatrigona moorei2017-02-03v4No1 / 13
59amnondominant digestive system, trigona spinipes2017-02-03v4No1 / 13
59amnondominant digestive system, apis cerana2017-02-02v4No1 / 13
59amnoncommon digestive system, apis andreniformis2017-02-02v4No1 / 13
59amnondominant digestive system, trigona hyalinata2017-02-02v4No1 / 15
59amnondominant digestive system, apis andreniformis2017-02-02v4No1 / 15
59amnondominant digestive system, apis florea2017-02-02v4No1 / 15
59amnoncommon digestive system, apis florea2017-02-02v4No1 / 16
59amnoncommon digestive system, apis mellifera2017-02-02v4No1 / 16
59amnoncommon digestive system, bombus pennsylvanicus2017-02-02v4No1 / 17
59amnondominant digestive system, apis dorsata2017-02-02v4No1 / 18
59amnondominant digestive system, apis mellifera2017-02-02v4No1 / 18
59amnoncommon digestive system, geniotrigona thoracica2017-02-03v4No1 / 19
59amnoncommon digestive system, sundatrigona moorei2017-02-03v4No1 / 20
59amnoncommon digestive system, centris atripes2017-02-03v4No1 / 20
59amnon high in united states of america austin compared to australia malaysia seoul china in digestive system apis mellifera 2017-02-02v4No1 / 25
59amnoncommon digestive system, trigona spinipes2017-02-03v4No1 / 30
59amnoncommon digestive system, apis dorsata2017-02-02v4No1 / 38
59amnoncommon digestive system, trigona hyalinata2017-02-02v4No1 / 43

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