Experiment ID: 59

Field Description
namestrain diversity and host specificity in a specialized gut symbiont of honeybees and bumblebees
srasrp071118
datamd5da3f4d2151d8220006667f471908d7fd
mapmd53a82ebefdbe7074f8c440414c98f9b17

Annotations for experiment:

term enrichment score
TermScore
apis mellifera0.208333
trigona hyalinata0.108108
apis dorsata0.108108
trigona spinipes0.108108
centris atripes0.108108
sundatrigona moorei0.108108
geniotrigona thoracica0.108108
apis florea0.108108
apis andreniformis0.108108
apis cerana0.108108
heterotrigona itama0.108108
paratrigona lineata0.108108
tetragonula fuscobalteata0.108108
bombus bifarius0.108108
bombus pennsylvanicus0.102564
LOWER IN china0.097561
digestive system0.071349
austin0.057143
LOWER IN australia0.057143
LOWER IN malaysia0.057143
LOWER IN seoul0.057143
malaysia0.057143
seoul0.057143
texas0.054054
pathogen0.046512
australia0.041667
united states of america0.009926
Fraction of dbbact annotations with this term covered by the query
TermScore
trigona hyalinata0.500000
apis dorsata0.500000
trigona spinipes0.500000
austin0.500000
LOWER IN australia0.500000
LOWER IN malaysia0.500000
LOWER IN seoul0.500000
centris atripes0.500000
sundatrigona moorei0.500000
geniotrigona thoracica0.500000
apis florea0.500000
apis andreniformis0.500000
apis cerana0.500000
heterotrigona itama0.500000
paratrigona lineata0.500000
tetragonula fuscobalteata0.500000
bombus bifarius0.500000
malaysia0.500000
seoul0.500000
apis mellifera0.333333
bombus pennsylvanicus0.333333
LOWER IN china0.250000
texas0.250000
pathogen0.100000
australia0.066667
digestive system0.037037
united states of america0.005405
Fraction of annotations for the query sequences containing the term
TermScore
digestive system0.969697
apis mellifera0.151515
trigona hyalinata0.060606
apis dorsata0.060606
trigona spinipes0.060606
united states of america0.060606
LOWER IN china0.060606
centris atripes0.060606
sundatrigona moorei0.060606
geniotrigona thoracica0.060606
bombus pennsylvanicus0.060606
apis florea0.060606
apis andreniformis0.060606
apis cerana0.060606
heterotrigona itama0.060606
paratrigona lineata0.060606
tetragonula fuscobalteata0.060606
bombus bifarius0.060606
austin0.030303
LOWER IN australia0.030303
LOWER IN malaysia0.030303
LOWER IN seoul0.030303
australia0.030303
malaysia0.030303
seoul0.030303
texas0.030303
pathogen0.030303
Exp. ID User ID Description Date Region Flag Sequences
59amnon high in australia malaysia seoul texas united states of america compared to china in apis mellifera digestive system 2017-02-02v4No1 / 1
59amnoncandidate pathogen (Melissococcus plutonius). Causes European Foulbrood of honeybees (other pathogen, apis mellifera)2017-02-02v4No1 / 1
59amnoncommon bombus bifarius, digestive system2017-02-03v4No1 / 6
59amnonhighfreq bombus bifarius, digestive system2017-02-03v4No1 / 6
59amnonhighfreq tetragonula fuscobalteata, digestive system2017-02-02v4No1 / 7
59amnoncommon tetragonula fuscobalteata, digestive system2017-02-02v4No1 / 8
59amnonhighfreq geniotrigona thoracica, digestive system2017-02-03v4No1 / 9
59amnoncommon paratrigona lineata, digestive system2017-02-03v4No1 / 10
59amnoncommon apis cerana, digestive system2017-02-02v4No1 / 10
59amnoncommon heterotrigona itama, digestive system2017-02-03v4No1 / 11
59amnon high in compared to in bombus pennsylvanicus digestive system 2017-02-02v4No1 / 11
59amnonhighfreq centris atripes, digestive system2017-02-03v4No1 / 11
59amnonhighfreq heterotrigona itama, digestive system2017-02-03v4No1 / 12
59amnonhighfreq paratrigona lineata, digestive system2017-02-03v4No1 / 12
59amnonhighfreq trigona spinipes, digestive system2017-02-03v4No1 / 13
59amnonhighfreq sundatrigona moorei, digestive system2017-02-03v4No1 / 13
59amnoncommon apis andreniformis, digestive system2017-02-02v4No1 / 13
59amnonhighfreq apis cerana, digestive system2017-02-02v4No1 / 13
59amnonhighfreq apis florea, digestive system2017-02-02v4No1 / 15
59amnonhighfreq trigona hyalinata, digestive system2017-02-02v4No1 / 15
59amnonhighfreq apis andreniformis, digestive system2017-02-02v4No1 / 15
59amnoncommon apis florea, digestive system2017-02-02v4No1 / 16
59amnoncommon apis mellifera, digestive system2017-02-02v4No1 / 16
59amnoncommon bombus pennsylvanicus, digestive system2017-02-02v4No1 / 17
59amnonhighfreq apis mellifera, digestive system2017-02-02v4No1 / 18
59amnonhighfreq apis dorsata, digestive system2017-02-02v4No1 / 18
59amnoncommon geniotrigona thoracica, digestive system2017-02-03v4No1 / 19
59amnoncommon centris atripes, digestive system2017-02-03v4No1 / 20
59amnoncommon sundatrigona moorei, digestive system2017-02-03v4No1 / 20
59amnon high in austin united states of america compared to australia malaysia seoul china in apis mellifera digestive system 2017-02-02v4No1 / 25
59amnoncommon trigona spinipes, digestive system2017-02-03v4No1 / 30
59amnoncommon apis dorsata, digestive system2017-02-02v4No1 / 38
59amnoncommon trigona hyalinata, digestive system2017-02-02v4No1 / 43

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