dbBact

×

Experiment ID: 593

Field	Description
name	comparative analysis of fecal microbiota composition between rheumatoid arthritis and osteoarthritis patients
sra	prjna511932
doi	http://dx.doi.org/10.3390/genes10100748
datamd5	14209dbcd63caefcc60d71d2d29c1b75
mapmd5	e2815e8ef757fb722205765c48df73aa

Annotations for experiment:

term enrichment score

Term	Score
osteoarthritis	0.500000
rheumatoid arthritis	0.400000
LOWER IN osteoarthritis	0.250000
LOWER IN rheumatoid arthritis	0.222222
south korea	0.153846
adult	0.011494
homo sapiens	0.007353
feces	0.006349

Fraction of dbbact annotations with this term covered by the query

Term	Score
osteoarthritis	0.500000
LOWER IN osteoarthritis	0.500000
rheumatoid arthritis	0.333333
LOWER IN rheumatoid arthritis	0.333333
south korea	0.083333
adult	0.005780
homo sapiens	0.003690
feces	0.003185

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
adult	1.000000
south korea	1.000000
osteoarthritis	0.500000
rheumatoid arthritis	0.500000
LOWER IN osteoarthritis	0.166667
LOWER IN rheumatoid arthritis	0.166667

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
593	amnon	high in osteoarthritis compared to rheumatoid arthritis in feces homo sapiens adult south korea	2020-03-08	v3	No	1 / 3
593	amnon	high in rheumatoid arthritis compared to osteoarthritis in feces homo sapiens adult south korea	2020-03-08	v3	No	1 / 4
593	amnon	dominant feces, homo sapiens, adult, south korea, rheumatoid arthritis	2020-03-08	v3	No	1 / 21
593	amnon	dominant feces, homo sapiens, adult, south korea, osteoarthritis	2020-03-08	v3	No	1 / 22
593	amnon	common feces, homo sapiens, adult, south korea, rheumatoid arthritis	2020-03-08	v3	No	1 / 62
593	amnon	common feces, homo sapiens, adult, south korea, osteoarthritis	2020-03-08	v3	No	1 / 68

Problems / suggestions? Please email info AT dbbact DOT org