Experiment ID: 598

Field Description
namecitizen science charts two major “stomatotypes” in the oral microbiome of adolescents and reveals links with habits and drinking water composition
sraprjna427101
doihttps://doi.org/10.1186/s40168-018-0592-3
datamd513258f016a047e280e1a16c4873c74ff
mapmd5981da161aa813ef4a41c4dc60cda5bbc

Annotations for experiment:

term enrichment score
TermScore
age 13-15 years0.620690
oral cavity0.246914
LOWER IN age 13-15 years0.153846
teeth braces0.153846
braces0.153846
diet without sweets0.153846
LOWER IN diet containing sweets0.153846
LOWER IN teeth braces0.153846
LOWER IN braces0.153846
diet containing sweets0.153846
LOWER IN diet without sweets0.153846
kingdom of spain0.142857
LOWER IN male0.142857
LOWER IN child0.111111
male0.100000
child0.082569
LOWER IN female0.080000
LOWER IN adult0.068966
saliva0.066445
female0.040000
adult0.018349
LOWER IN control0.013245
control0.013158
homo sapiens0.010989
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN age 13-15 years0.500000
age 13-15 years0.500000
teeth braces0.500000
braces0.500000
diet without sweets0.500000
LOWER IN diet containing sweets0.500000
LOWER IN teeth braces0.500000
LOWER IN braces0.500000
diet containing sweets0.500000
LOWER IN diet without sweets0.500000
LOWER IN male0.333333
oral cavity0.142857
LOWER IN child0.142857
male0.111111
kingdom of spain0.076923
LOWER IN female0.071429
LOWER IN adult0.055556
child0.043478
saliva0.034483
female0.025641
adult0.010204
LOWER IN control0.007143
control0.007092
homo sapiens0.005525
Fraction of annotations for the query sequences containing the term
TermScore
kingdom of spain1.000000
homo sapiens1.000000
saliva0.909091
oral cavity0.909091
child0.818182
age 13-15 years0.818182
adult0.090909
LOWER IN child0.090909
LOWER IN age 13-15 years0.090909
LOWER IN control0.090909
teeth braces0.090909
braces0.090909
LOWER IN adult0.090909
diet without sweets0.090909
LOWER IN diet containing sweets0.090909
contamination0.090909
control0.090909
LOWER IN teeth braces0.090909
LOWER IN braces0.090909
male0.090909
LOWER IN female0.090909
female0.090909
LOWER IN male0.090909
diet containing sweets0.090909
LOWER IN diet without sweets0.090909
Exp. ID User ID Description Date Region Flag Sequences
598amnonhigher in kids that eat sweets ( high in diet containing sweets compared to diet without sweets in child age 13-15 years saliva kingdom of spain oral cavity homo sapiens )2020-03-25v3No1 / 3
598amnon high in male compared to female in child age 13-15 years saliva kingdom of spain oral cavity homo sapiens 2020-03-25v3No1 / 5
598amnon high in female compared to male in child age 13-15 years saliva kingdom of spain oral cavity homo sapiens 2020-03-25v3No1 / 5
598amnonlower in mouthwash of kids with braces compared to no braces ( high in control compared to teeth braces braces in child age 13-15 years saliva kingdom of spain oral cavity homo sapiens )2020-03-25v3No1 / 11
598amnonprobable contaminant (collection date dependent) (contamination)2020-03-25v3No1 / 14
598amnondominant child, age 13-15 years, saliva, kingdom of spain, oral cavity, homo sapiens2020-03-25v3No1 / 16
598amnonhigher in kids that do no eat sweets ( high in diet without sweets compared to diet containing sweets in child age 13-15 years saliva kingdom of spain oral cavity homo sapiens )2020-03-25v3No1 / 17
598amnonhigher in mouthwash of students compared to teachers ( high in child age 13-15 years compared to adult in saliva kingdom of spain oral cavity homo sapiens )2020-03-25v3No1 / 52
598amnonhigher in mouthwash of kids with braces compared to no braces ( high in teeth braces braces compared to control in child age 13-15 years saliva kingdom of spain oral cavity homo sapiens )2020-03-25v3No1 / 79
598amnoncommon child, age 13-15 years, saliva, kingdom of spain, oral cavity, homo sapiens2020-03-25v3No1 / 124
598amnonlower in mouthwash of students compared to teachers ( high in adult compared to child age 13-15 years in saliva kingdom of spain oral cavity homo sapiens )2020-03-25v3No1 / 232

Problems / suggestions? Please email info AT dbbact DOT org