Experiment ID: 607

Field Description
namethe nasal and gut microbiome in parkinson's disease and idiopathic rapid eye movement sleep behavior disorder.
sraprjna381395
doi10.1002/mds.27105
datamd5fc5e56148195d0eed9e429b7e06c0d39
mapmd5fd835052624e392c69f4ba9a361d4143

Annotations for experiment:

term enrichment score
TermScore
nasal wash0.484848
parkinson's disease0.413793
rem sleep behavior disorder0.370370
nasopharynx0.168224
LOWER IN parkinson's disease0.160000
germany0.117647
LOWER IN rem sleep behavior disorder0.105263
control0.012282
LOWER IN control0.011940
homo sapiens0.008547
feces0.007350
Fraction of dbbact annotations with this term covered by the query
TermScore
rem sleep behavior disorder0.500000
parkinson's disease0.500000
nasal wash0.500000
LOWER IN rem sleep behavior disorder0.500000
LOWER IN parkinson's disease0.250000
nasopharynx0.100000
germany0.062500
LOWER IN control0.006289
control0.006250
homo sapiens0.004292
feces0.003704
Fraction of annotations for the query sequences containing the term
TermScore
germany1.000000
homo sapiens1.000000
nasopharynx0.529412
feces0.470588
nasal wash0.470588
control0.352941
parkinson's disease0.352941
rem sleep behavior disorder0.294118
LOWER IN control0.117647
LOWER IN parkinson's disease0.117647
contamination0.058824
LOWER IN rem sleep behavior disorder0.058824
Exp. ID User ID Description Date Region Flag Sequences
607amnon high in control compared to parkinson's disease in germany nasopharynx homo sapiens nasal wash 2020-04-19v4No1 / -7
607amnon high in parkinson's disease rem sleep behavior disorder compared to control in germany homo sapiens feces 2020-04-19v4No1 / -5
607amnon high in control compared to rem sleep behavior disorder parkinson's disease in germany homo sapiens feces 2020-04-19v4No1 / -4
607amnon high in parkinson's disease compared to control in germany nasopharynx homo sapiens nasal wash 2020-04-19v4No1 / -3
607amnonhigher in blanks compared to nasopharyngeal samples (contamination)2020-04-19v4No1 / 1
607amnondominant germany, homo sapiens, nasopharynx, nasal wash, parkinson's disease2020-04-19v4No1 / 8
607amnondominant germany, homo sapiens, feces, control2020-04-19v4No1 / 9
607amnoncommon germany, homo sapiens, nasopharynx, nasal wash, control2020-04-19v4No1 / 9
607amnondominant germany, homo sapiens, nasopharynx, nasal wash, control2020-04-19v4No1 / 9
607amnondominant germany, homo sapiens, feces, parkinson's disease2020-04-19v4No1 / 10
607amnondominant germany, homo sapiens, nasopharynx, nasal wash, rem sleep behavior disorder2020-04-19v4No1 / 10
607amnoncommon germany, homo sapiens, nasopharynx, nasal wash, parkinson's disease2020-04-19v4No1 / 11
607amnondominant germany, homo sapiens, feces, rem sleep behavior disorder2020-04-19v4No1 / 13
607amnoncommon germany, homo sapiens, nasopharynx, nasal wash, rem sleep behavior disorder2020-04-19v4No1 / 17
607amnoncommon germany, homo sapiens, feces, parkinson's disease2020-04-19v4No1 / 117
607amnoncommon germany, homo sapiens, feces, control2020-04-19v4No1 / 120
607amnoncommon germany, homo sapiens, feces, rem sleep behavior disorder2020-04-19v4No1 / 126

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