Experiment ID: 615

Field Description
nameunlocking the bacterial and fungal communities assemblages of sugarcane microbiome
doi10.1038/srep28774
srasrp076731
mapmd52db6df0c8a46f66d083cd7e4e9a1c0b2
datamd5be6443ac3b0c5b14877a6f5cb62014df

Annotations for experiment:

term enrichment score
TermScore
campinas0.666667
saccharum0.486486
sugarcane0.486486
greenhouse0.400000
exosphere0.375000
endosphere0.341463
upper stem0.285714
stem surface0.230769
leaf surface0.187500
leaf endosphere0.187500
LOWER IN upper stem0.166667
stem0.166667
LOWER IN stem0.153846
LOWER IN leaf0.117647
brazil0.100000
root0.092308
LOWER IN endosphere0.090909
LOWER IN stem surface0.090909
LOWER IN leaf endosphere0.090909
LOWER IN stem endosphere0.090909
stem endosphere0.086957
LOWER IN leaf surface0.086957
leaf0.085714
LOWER IN rhizosphere0.074074
LOWER IN root0.064516
LOWER IN soil0.057143
rhizosphere0.040816
soil0.020270
Fraction of dbbact annotations with this term covered by the query
TermScore
campinas0.500000
LOWER IN endosphere0.500000
LOWER IN stem surface0.500000
LOWER IN upper stem0.500000
exosphere0.500000
LOWER IN leaf endosphere0.500000
upper stem0.500000
stem surface0.500000
LOWER IN stem endosphere0.500000
saccharum0.333333
sugarcane0.333333
endosphere0.333333
LOWER IN stem0.333333
stem endosphere0.333333
LOWER IN leaf surface0.333333
greenhouse0.250000
leaf surface0.250000
leaf endosphere0.250000
LOWER IN leaf0.142857
stem0.142857
LOWER IN root0.090909
LOWER IN soil0.066667
root0.066667
LOWER IN rhizosphere0.058824
brazil0.052632
leaf0.050000
rhizosphere0.022727
soil0.010870
Fraction of annotations for the query sequences containing the term
TermScore
campinas1.000000
brazil1.000000
greenhouse1.000000
saccharum0.900000
sugarcane0.900000
endosphere0.350000
leaf0.300000
exosphere0.300000
rhizosphere0.200000
upper stem0.200000
stem0.200000
soil0.150000
root0.150000
leaf surface0.150000
stem surface0.150000
leaf endosphere0.150000
LOWER IN rhizosphere0.100000
LOWER IN upper stem0.100000
LOWER IN stem0.100000
LOWER IN leaf0.100000
LOWER IN soil0.050000
LOWER IN endosphere0.050000
LOWER IN root0.050000
LOWER IN stem surface0.050000
LOWER IN leaf endosphere0.050000
stem endosphere0.050000
LOWER IN leaf surface0.050000
LOWER IN stem endosphere0.050000
Exp. ID User ID Description Date Region Flag Sequences
615amnondominant saccharum, sugarcane, rhizosphere, campinas, brazil, greenhouse2020-04-27v4No1 / 3
615amnondominant endosphere, root, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 6
615amnondominant in control soil with no sugarcane (dominant campinas, brazil, greenhouse, soil)2020-04-27v4No1 / 8
615amnondominant leaf endosphere, leaf, endosphere, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 13
615amnondominant stem surface, upper stem, stem, exosphere, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 18
615amnondominant exosphere, leaf surface, leaf, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 19
615amnon high in leaf endosphere leaf compared to upper stem stem endosphere stem in endosphere saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 118
615amnoncommon leaf endosphere, leaf, endosphere, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 122
615amnoncommon stem surface, upper stem, stem, exosphere, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 129
615amnon high in stem surface upper stem stem compared to leaf surface leaf in exosphere saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 143
615amnoncommon exosphere, leaf surface, leaf, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 143
615amnon high in stem endosphere upper stem stem compared to leaf endosphere leaf in endosphere saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 153
615amnon high in soil compared to rhizosphere in saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 306
615amnon high in leaf surface leaf compared to stem surface upper stem stem in exosphere saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 321
615amnon high in endosphere root compared to rhizosphere in saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 529
615amnoncommon endosphere, root, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 776
615amnoncommon in control soil with no sugarcane (common campinas, brazil, greenhouse, soil)2020-04-27v4No1 / 780
615amnon high in rhizosphere compared to endosphere root in saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 913
615amnoncommon saccharum, sugarcane, rhizosphere, campinas, brazil, greenhouse2020-04-27v4No1 / 974
615amnon high in rhizosphere compared to soil in saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 1181

Problems / suggestions? Please email info AT dbbact DOT org