Experiment ID: 615

Field Description
nameunlocking the bacterial and fungal communities assemblages of sugarcane microbiome
srasrp076731
doi10.1038/srep28774
datamd5be6443ac3b0c5b14877a6f5cb62014df
mapmd52db6df0c8a46f66d083cd7e4e9a1c0b2

Annotations for experiment:

term enrichment score
TermScore
campinas0.666667
saccharum0.486486
sugarcane0.486486
exosphere0.375000
endosphere0.291667
upper stem0.285714
greenhouse0.285714
stem surface0.230769
leaf endosphere0.187500
leaf surface0.171429
LOWER IN upper stem0.166667
stem0.166667
LOWER IN stem0.153846
LOWER IN leaf0.117647
root0.092308
LOWER IN endosphere0.090909
LOWER IN stem surface0.090909
LOWER IN leaf endosphere0.090909
LOWER IN stem endosphere0.090909
stem endosphere0.086957
LOWER IN leaf surface0.086957
brazil0.080000
leaf0.078947
LOWER IN rhizosphere0.066667
LOWER IN root0.064516
LOWER IN soil0.054054
rhizosphere0.035714
soil0.018576
Fraction of dbbact annotations with this term covered by the query
TermScore
campinas0.500000
LOWER IN endosphere0.500000
LOWER IN upper stem0.500000
LOWER IN stem surface0.500000
exosphere0.500000
upper stem0.500000
LOWER IN leaf endosphere0.500000
stem surface0.500000
LOWER IN stem endosphere0.500000
saccharum0.333333
sugarcane0.333333
LOWER IN stem0.333333
stem endosphere0.333333
LOWER IN leaf surface0.333333
endosphere0.250000
leaf endosphere0.250000
leaf surface0.200000
greenhouse0.166667
stem0.142857
LOWER IN leaf0.142857
LOWER IN root0.090909
root0.066667
LOWER IN soil0.058824
LOWER IN rhizosphere0.050000
leaf0.045455
brazil0.041667
rhizosphere0.019608
soil0.009901
Fraction of annotations for the query sequences containing the term
TermScore
brazil1.000000
greenhouse1.000000
campinas1.000000
saccharum0.900000
sugarcane0.900000
endosphere0.350000
leaf0.300000
exosphere0.300000
rhizosphere0.200000
stem0.200000
upper stem0.200000
soil0.150000
root0.150000
leaf surface0.150000
stem surface0.150000
leaf endosphere0.150000
LOWER IN rhizosphere0.100000
LOWER IN stem0.100000
LOWER IN upper stem0.100000
LOWER IN leaf0.100000
LOWER IN soil0.050000
LOWER IN endosphere0.050000
LOWER IN root0.050000
LOWER IN stem surface0.050000
stem endosphere0.050000
LOWER IN leaf endosphere0.050000
LOWER IN leaf surface0.050000
LOWER IN stem endosphere0.050000
Number of experiments associating the term to the sequence
TermScore
rhizosphere1.000000
LOWER IN soil1.000000
brazil1.000000
greenhouse1.000000
campinas1.000000
saccharum1.000000
sugarcane1.000000
LOWER IN endosphere1.000000
LOWER IN root1.000000
soil1.000000
endosphere1.000000
root1.000000
LOWER IN rhizosphere1.000000
leaf1.000000
leaf surface1.000000
LOWER IN stem1.000000
LOWER IN upper stem1.000000
LOWER IN stem surface1.000000
exosphere1.000000
stem1.000000
stem endosphere1.000000
upper stem1.000000
LOWER IN leaf1.000000
LOWER IN leaf endosphere1.000000
stem surface1.000000
LOWER IN leaf surface1.000000
leaf endosphere1.000000
LOWER IN stem endosphere1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
615amnondominant rhizosphere, brazil, greenhouse, campinas, saccharum, sugarcane2020-04-27v41 / 3approvedNo
615amnondominant brazil, endosphere, greenhouse, root, campinas, saccharum, sugarcane2020-04-27v41 / 6approvedNo
615amnondominant in control soil with no sugarcane (dominant soil, brazil, greenhouse, campinas)2020-04-27v41 / 8approvedNo
615amnondominant leaf, brazil, endosphere, leaf endosphere, greenhouse, campinas, saccharum, sugarcane2020-04-27v41 / 13approvedNo
615amnondominant stem, brazil, greenhouse, exosphere, campinas, saccharum, sugarcane, upper stem, stem surface2020-04-27v41 / 18approvedNo
615amnondominant leaf, brazil, leaf surface, greenhouse, exosphere, campinas, saccharum, sugarcane2020-04-27v41 / 19approvedNo
615amnon high in leaf leaf endosphere compared to stem stem endosphere upper stem in brazil endosphere greenhouse campinas saccharum sugarcane 2020-04-27v41 / 118approvedNo
615amnoncommon leaf, brazil, endosphere, leaf endosphere, greenhouse, campinas, saccharum, sugarcane2020-04-27v41 / 122approvedNo
615amnoncommon stem, brazil, greenhouse, exosphere, campinas, saccharum, sugarcane, upper stem, stem surface2020-04-27v41 / 129approvedNo
615amnon high in stem upper stem stem surface compared to leaf leaf surface in brazil greenhouse exosphere campinas saccharum sugarcane 2020-04-27v41 / 143approvedNo
615amnoncommon leaf, brazil, leaf surface, greenhouse, exosphere, campinas, saccharum, sugarcane2020-04-27v41 / 143approvedNo
615amnon high in stem stem endosphere upper stem compared to leaf leaf endosphere in brazil endosphere greenhouse campinas saccharum sugarcane 2020-04-27v41 / 153approvedNo
615amnon high in soil compared to rhizosphere in brazil greenhouse campinas saccharum sugarcane 2020-04-27v41 / 306approvedNo
615amnon high in leaf leaf surface compared to stem upper stem stem surface in brazil greenhouse exosphere campinas saccharum sugarcane 2020-04-27v41 / 321approvedNo
615amnon high in endosphere root compared to rhizosphere in brazil greenhouse campinas saccharum sugarcane 2020-04-27v41 / 529approvedNo
615amnoncommon brazil, endosphere, greenhouse, root, campinas, saccharum, sugarcane2020-04-27v41 / 776approvedNo
615amnoncommon in control soil with no sugarcane (common soil, brazil, greenhouse, campinas)2020-04-27v41 / 780approvedNo
615amnon high in rhizosphere compared to endosphere root in brazil greenhouse campinas saccharum sugarcane 2020-04-27v41 / 913approvedNo
615amnoncommon rhizosphere, brazil, greenhouse, campinas, saccharum, sugarcane2020-04-27v41 / 974approvedNo
615amnon high in rhizosphere compared to soil in brazil greenhouse campinas saccharum sugarcane 2020-04-27v41 / 1181approvedNo

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