Experiment ID: 617

Field Description
nameshift in the cow milk microbiota during alpine pasture as analyzed by culture dependent and high-throughput sequencing techniques
doihttps://doi.org/10.1016/j.fm.2020.103504
sraprjna528228
mapmd515f847d79f0670c20eb7e2f8ebf13485
datamd55c104e44bec3c02ddd7f3a759a18e21b

Annotations for experiment:

term enrichment score
TermScore
cow milk (raw)0.666667
cow milk (fluid)0.666667
milk0.666667
lowland farm0.555556
lowland pasture0.555556
alpine pasture0.428571
alpine0.428571
LOWER IN alpine pasture0.200000
LOWER IN alpine0.200000
LOWER IN lowland farm0.200000
LOWER IN lowland pasture0.200000
LOWER IN june0.200000
LOWER IN spring0.200000
october0.200000
LOWER IN october0.200000
june0.200000
spring0.200000
italy0.166667
LOWER IN autumn0.153846
autumn0.111111
farm0.068966
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN alpine pasture0.500000
LOWER IN alpine0.500000
lowland farm0.500000
lowland pasture0.500000
cow milk (raw)0.500000
cow milk (fluid)0.500000
milk0.500000
LOWER IN lowland farm0.500000
LOWER IN lowland pasture0.500000
alpine pasture0.500000
alpine0.500000
LOWER IN june0.500000
LOWER IN spring0.500000
october0.500000
LOWER IN october0.500000
june0.500000
spring0.500000
LOWER IN autumn0.200000
autumn0.100000
italy0.090909
farm0.035714
Fraction of annotations for the query sequences containing the term
TermScore
farm1.000000
italy1.000000
cow milk (raw)1.000000
cow milk (fluid)1.000000
milk1.000000
lowland farm0.625000
lowland pasture0.625000
alpine pasture0.375000
alpine0.375000
LOWER IN alpine pasture0.125000
LOWER IN alpine0.125000
LOWER IN lowland farm0.125000
LOWER IN lowland pasture0.125000
LOWER IN june0.125000
LOWER IN spring0.125000
october0.125000
autumn0.125000
LOWER IN october0.125000
LOWER IN autumn0.125000
june0.125000
spring0.125000

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