dbBact

Field	Description
name	the microbiome and resistome of chimpanzees, gorillas, and humans across host lifestyle and geography
doi	https://doi.org/10.1038/s41396-020-0634-2
sra	prjna539933
mapmd5	730e041ce600cab219775b207ddc8d77
datamd5	8fe30138a9e957f7041d95a8b642f118

term enrichment score

Term	Score
nouabale-ndoki national park	0.500000
republic of congo	0.500000
chimpanzee	0.321429
saint louis zoo	0.285714
saint louis	0.285714
lincoln park zoo	0.285714
pan troglodytes troglodytes	0.250000
chicago	0.250000
gorilla gorilla	0.225806
pan troglodytes	0.222222
LOWER IN nouabale-ndoki national park	0.166667
LOWER IN republic of congo	0.166667
gorilla gorilla gorilla	0.166667
LOWER IN pan troglodytes troglodytes	0.153846
village	0.142857
zoological garden	0.117647
rural community	0.086957
LOWER IN chimpanzee	0.083333
LOWER IN pan troglodytes	0.080000
LOWER IN zoological garden	0.080000
LOWER IN gorilla gorilla	0.076923
wild	0.070175
LOWER IN wild	0.055556
united states of america	0.007663
LOWER IN united states of america	0.007435
homo sapiens	0.006689
feces	0.005780

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN nouabale-ndoki national park	0.500000
LOWER IN republic of congo	0.500000
gorilla gorilla gorilla	0.500000
saint louis zoo	0.500000
saint louis	0.500000
nouabale-ndoki national park	0.500000
republic of congo	0.500000
lincoln park zoo	0.500000
LOWER IN pan troglodytes troglodytes	0.333333
pan troglodytes troglodytes	0.333333
chicago	0.333333
chimpanzee	0.250000
LOWER IN chimpanzee	0.250000
village	0.250000
pan troglodytes	0.200000
LOWER IN pan troglodytes	0.200000
gorilla gorilla	0.166667
LOWER IN gorilla gorilla	0.166667
rural community	0.076923
zoological garden	0.066667
LOWER IN zoological garden	0.066667
LOWER IN wild	0.038462
wild	0.038462
united states of america	0.003861
LOWER IN united states of america	0.003861
homo sapiens	0.003460
feces	0.002899

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
united states of america	0.500000
zoological garden	0.500000
nouabale-ndoki national park	0.500000
republic of congo	0.500000
chimpanzee	0.450000
wild	0.400000
gorilla gorilla	0.350000
pan troglodytes	0.250000
saint louis zoo	0.200000
saint louis	0.200000
pan troglodytes troglodytes	0.200000
lincoln park zoo	0.200000
chicago	0.200000
LOWER IN nouabale-ndoki national park	0.100000
LOWER IN wild	0.100000
LOWER IN republic of congo	0.100000
gorilla gorilla gorilla	0.100000
LOWER IN pan troglodytes troglodytes	0.100000
LOWER IN zoological garden	0.100000
LOWER IN united states of america	0.100000
village	0.100000
rural community	0.100000
homo sapiens	0.100000
LOWER IN gorilla gorilla	0.050000
LOWER IN chimpanzee	0.050000
LOWER IN pan troglodytes	0.050000

Number of experiments associating the term to the sequence

Term	Score
LOWER IN nouabale-ndoki national park	1.000000
LOWER IN wild	1.000000
LOWER IN republic of congo	1.000000
united states of america	1.000000
zoological garden	1.000000
gorilla gorilla gorilla	1.000000
feces	1.000000
LOWER IN pan troglodytes troglodytes	1.000000
pan troglodytes	1.000000
chimpanzee	1.000000
saint louis zoo	1.000000
saint louis	1.000000
gorilla gorilla	1.000000
LOWER IN gorilla gorilla	1.000000
pan troglodytes troglodytes	1.000000
nouabale-ndoki national park	1.000000
republic of congo	1.000000
wild	1.000000
lincoln park zoo	1.000000
chicago	1.000000
LOWER IN zoological garden	1.000000
LOWER IN united states of america	1.000000
LOWER IN chimpanzee	1.000000
LOWER IN pan troglodytes	1.000000
village	1.000000
rural community	1.000000
homo sapiens	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
620	amnon	dominant saint louis zoo, saint louis, united states of america, zoological garden, feces, gorilla gorilla	2020-05-06	v4	1 / 8	approved	No
620	amnon	dominant lincoln park zoo, united states of america, chicago, zoological garden, feces, gorilla gorilla	2020-05-06	v4	1 / 11	approved	No
620	amnon	dominant village, rural community, homo sapiens, nouabale-ndoki national park, republic of congo, feces	2020-05-06	v4	1 / 13	approved	No
620	amnon	dominant saint louis zoo, saint louis, united states of america, pan troglodytes, chimpanzee, zoological garden, feces	2020-05-06	v4	1 / 15	approved	No
620	amnon	dominant lincoln park zoo, chicago, united states of america, pan troglodytes, chimpanzee, zoological garden, feces	2020-05-06	v4	1 / 16	approved	No
620	amnon	dominant feces, wild, nouabale-ndoki national park, republic of congo, gorilla gorilla	2020-05-06	v4	1 / 24	approved	No
620	amnon	dominant chimpanzee, pan troglodytes troglodytes, wild, nouabale-ndoki national park, republic of congo, feces	2020-05-06	v4	1 / 28	approved	No
620	amnon	common feces, wild, nouabale-ndoki national park, republic of congo, gorilla gorilla	2020-05-06	v4	1 / 196	approved	No
620	amnon	common village, rural community, homo sapiens, nouabale-ndoki national park, republic of congo, feces	2020-05-06	v4	1 / 197	approved	No
620	amnon	common chimpanzee, pan troglodytes troglodytes, wild, nouabale-ndoki national park, republic of congo, feces	2020-05-06	v4	1 / 238	approved	No
620	amnon	high in gorilla gorilla compared to pan troglodytes troglodytes chimpanzee in nouabale-ndoki national park republic of congo wild feces	2020-05-06	v4	1 / 351	approved	No
620	amnon	high in nouabale-ndoki national park wild republic of congo pan troglodytes troglodytes compared to united states of america zoological garden pan troglodytes in chimpanzee feces	2020-05-06	v4	1 / 351	approved	No
620	amnon	common lincoln park zoo, chicago, united states of america, pan troglodytes, chimpanzee, zoological garden, feces	2020-05-06	v4	1 / 358	approved	No
620	amnon	high in nouabale-ndoki national park wild republic of congo compared to zoological garden united states of america in gorilla gorilla gorilla feces	2020-05-06	v4	1 / 368	approved	No
620	amnon	common lincoln park zoo, united states of america, chicago, zoological garden, feces, gorilla gorilla	2020-05-06	v4	1 / 384	approved	No
620	amnon	common saint louis zoo, saint louis, united states of america, pan troglodytes, chimpanzee, zoological garden, feces	2020-05-06	v4	1 / 433	approved	No
620	amnon	high in chimpanzee pan troglodytes troglodytes compared to gorilla gorilla in nouabale-ndoki national park republic of congo wild feces	2020-05-06	v4	1 / 478	approved	No
620	amnon	common saint louis zoo, saint louis, united states of america, zoological garden, feces, gorilla gorilla	2020-05-06	v4	1 / 530	approved	No
620	amnon	high in united states of america zoological garden pan troglodytes compared to nouabale-ndoki national park republic of congo wild pan troglodytes troglodytes in chimpanzee feces	2020-05-06	v4	1 / 964	approved	No
620	amnon	high in united states of america zoological garden compared to nouabale-ndoki national park wild republic of congo in gorilla gorilla gorilla feces	2020-05-06	v4	1 / 1019	approved	No

Experiment ID: 620

Annotations for experiment: