Experiment ID: 629

Field Description
namehiv-associated gut dysbiosis is independent of sexual practice and correlates with noncommunicable diseases
doihttps://doi.org/10.1038/s41467-020-16222-8
sraprjna589036
mapmd5565236becda481cf3b7de5cf88de4263
datamd55e4edcf34410f25395f8c37f2c52a5b6

Annotations for experiment:

term enrichment score
TermScore
amsterdam0.400000
kingdom of the netherlands0.285714
LOWER IN acquired immunodeficiency syndrome0.266667
msw0.230769
heterosexual0.230769
msm0.228571
homosexual0.228571
acquired immunodeficiency syndrome0.153846
LOWER IN hiv infection0.148148
male0.137931
LOWER IN msw0.125000
LOWER IN heterosexual0.125000
LOWER IN homosexual0.125000
LOWER IN msm0.125000
hiv infection0.100000
female0.032000
adult0.013986
control0.012012
LOWER IN control0.011696
homo sapiens0.008475
feces0.007273
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN acquired immunodeficiency syndrome0.500000
acquired immunodeficiency syndrome0.500000
amsterdam0.250000
LOWER IN msw0.200000
LOWER IN heterosexual0.200000
msw0.200000
heterosexual0.200000
LOWER IN homosexual0.200000
LOWER IN msm0.200000
msm0.166667
homosexual0.166667
kingdom of the netherlands0.166667
LOWER IN hiv infection0.125000
male0.111111
hiv infection0.111111
female0.017544
adult0.007042
LOWER IN control0.006250
control0.006211
homo sapiens0.004255
feces0.003650
Fraction of annotations for the query sequences containing the term
TermScore
adult1.000000
amsterdam1.000000
kingdom of the netherlands1.000000
feces1.000000
homo sapiens1.000000
msm0.363636
homosexual0.363636
msw0.272727
heterosexual0.272727
male0.181818
female0.181818
LOWER IN acquired immunodeficiency syndrome0.181818
LOWER IN hiv infection0.181818
control0.181818
LOWER IN msw0.090909
LOWER IN heterosexual0.090909
LOWER IN homosexual0.090909
LOWER IN msm0.090909
LOWER IN control0.090909
acquired immunodeficiency syndrome0.090909
hiv infection0.090909
Exp. ID User ID Description Date Region Flag Sequences
629amnon high in control compared to hiv infection acquired immunodeficiency syndrome in amsterdam kingdom of the netherlands adult homosexual msm feces homo sapiens 2020-05-31v4No1 / 1
629amnon high in acquired immunodeficiency syndrome hiv infection compared to control in adult amsterdam kingdom of the netherlands feces homo sapiens 2020-05-31v4No1 / 2
629amnondominant amsterdam, kingdom of the netherlands, adult, homosexual, msm, feces, homo sapiens2020-05-31v4No1 / 12
629amnondominant msw, heterosexual, amsterdam, kingdom of the netherlands, adult, feces, homo sapiens2020-05-31v4No1 / 12
629amnondominant female, amsterdam, kingdom of the netherlands, adult, feces, homo sapiens2020-05-31v4No1 / 14
629amnon high in control compared to acquired immunodeficiency syndrome hiv infection in adult amsterdam kingdom of the netherlands feces homo sapiens 2020-05-31v4No1 / 26
629amnon high in heterosexual msw compared to homosexual msm in male adult amsterdam kingdom of the netherlands feces homo sapiens 2020-05-31v4No1 / 77
629amnoncommon female, amsterdam, kingdom of the netherlands, adult, feces, homo sapiens2020-05-31v4No1 / 81
629amnoncommon msw, heterosexual, amsterdam, kingdom of the netherlands, adult, feces, homo sapiens2020-05-31v4No1 / 89
629amnoncommon amsterdam, kingdom of the netherlands, adult, homosexual, msm, feces, homo sapiens2020-05-31v4No1 / 133
629amnon high in msm homosexual compared to msw heterosexual in male adult amsterdam kingdom of the netherlands feces homo sapiens 2020-05-31v4No1 / 146

Problems / suggestions? Please email info AT dbbact DOT org