Experiment ID: 644

Field Description
namegut microbiome composition in the hispanic community health study/study of latinos is shaped by geographic relocation, environmental factors, and obesity
sraerp117287
qiita11666
doihttps://doi.org/10.1186/s13059-019-1831-z
datamd50efb27c9915c17c26de1fded6d2fb9fc
mapmd5bff555d37961eadd300f1fb65c7d96c0

Annotations for experiment:

term enrichment score
TermScore
hispanic or latin american0.400000
LOWER IN cuba0.142857
LOWER IN mexico0.142857
non usa born0.142857
LOWER IN usa born0.142857
usa born0.142857
LOWER IN non usa born0.142857
cuba0.133333
LOWER IN body mass index0.117647
old age0.105263
LOWER IN young age0.105263
body mass index0.105263
mexico0.095238
low bmi0.095238
LOWER IN low bmi0.095238
young age0.095238
LOWER IN old age0.095238
LOWER IN high bmi0.090909
high bmi0.076923
LOWER IN male0.060606
age0.060606
LOWER IN female0.055556
male0.035714
female0.024390
adult0.009662
united states of america0.007067
homo sapiens0.006173
feces0.005208
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN cuba0.500000
LOWER IN mexico0.500000
non usa born0.500000
LOWER IN usa born0.500000
usa born0.500000
LOWER IN non usa born0.500000
cuba0.333333
hispanic or latin american0.250000
LOWER IN body mass index0.200000
old age0.142857
LOWER IN young age0.142857
body mass index0.142857
mexico0.111111
low bmi0.111111
LOWER IN low bmi0.111111
young age0.111111
LOWER IN old age0.111111
LOWER IN high bmi0.100000
high bmi0.071429
LOWER IN male0.047619
age0.047619
LOWER IN female0.041667
male0.022727
female0.014286
adult0.004854
united states of america0.003546
homo sapiens0.003096
feces0.002611
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
homo sapiens1.000000
united states of america1.000000
adult1.000000
hispanic or latin american1.000000
mexico0.083333
LOWER IN cuba0.083333
cuba0.083333
LOWER IN mexico0.083333
non usa born0.083333
LOWER IN usa born0.083333
usa born0.083333
LOWER IN non usa born0.083333
female0.083333
LOWER IN male0.083333
male0.083333
LOWER IN female0.083333
low bmi0.083333
LOWER IN body mass index0.083333
LOWER IN high bmi0.083333
age0.083333
old age0.083333
LOWER IN young age0.083333
body mass index0.083333
high bmi0.083333
LOWER IN low bmi0.083333
young age0.083333
LOWER IN old age0.083333
Number of experiments associating the term to the sequence
TermScore
mexico1.000000
LOWER IN cuba1.000000
feces1.000000
homo sapiens1.000000
united states of america1.000000
adult1.000000
hispanic or latin american1.000000
cuba1.000000
LOWER IN mexico1.000000
non usa born1.000000
LOWER IN usa born1.000000
usa born1.000000
LOWER IN non usa born1.000000
female1.000000
LOWER IN male1.000000
male1.000000
LOWER IN female1.000000
low bmi1.000000
LOWER IN body mass index1.000000
LOWER IN high bmi1.000000
age1.000000
old age1.000000
LOWER IN young age1.000000
body mass index1.000000
high bmi1.000000
LOWER IN low bmi1.000000
young age1.000000
LOWER IN old age1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
644amnonhigher in younger adults (total age range 20-80) ( high in young age compared to old age in feces homo sapiens united states of america adult hispanic or latin american )2020-08-31v41 / 5approvedNo
644amnonpositively correalted with bmi ( high in body mass index high bmi compared to low bmi in feces homo sapiens united states of america adult hispanic or latin american )2020-08-31v41 / 7approvedNo
644amnonhigher in older adults (total age range 20-80) ( high in age old age compared to young age in feces homo sapiens united states of america adult hispanic or latin american )2020-08-31v41 / 11approvedNo
644amnondominant feces, homo sapiens, united states of america, adult, hispanic or latin american2020-08-31v41 / 13approvedNo
644amnonnegatively correalted with bmi ( high in low bmi compared to body mass index high bmi in feces homo sapiens united states of america adult hispanic or latin american )2020-08-31v41 / 42approvedNo
644amnon high in male compared to female in feces homo sapiens united states of america adult hispanic or latin american 2020-08-31v41 / 58approvedNo
644amnon high in female compared to male in feces homo sapiens united states of america adult hispanic or latin american 2020-08-31v41 / 69approvedNo
644amnoncommon feces, homo sapiens, united states of america, adult, hispanic or latin american2020-08-31v41 / 71approvedNo
644amnonlower in individuals born in latin america compared to indivuals born in usa ( high in usa born compared to non usa born in feces homo sapiens united states of america adult hispanic or latin american )2020-08-31v41 / 77approvedNo
644amnonhigher in individuals born in latin america compared to indivuals born in usa ( high in non usa born compared to usa born in feces homo sapiens united states of america adult hispanic or latin american )2020-08-31v41 / 107approvedNo
644amnonlower in individuals born in mexico compared to cuba ( high in cuba compared to mexico in feces homo sapiens united states of america adult hispanic or latin american )2020-08-31v41 / 134approvedNo
644amnonhigher in individuals born in mexico compared to cuba ( high in mexico compared to cuba in feces homo sapiens united states of america adult hispanic or latin american )2020-08-31v41 / 136approvedNo

Problems / suggestions? Please email info AT dbbact DOT org