Experiment ID: 649

Field Description
namethe microbial biogeography of the gastrointestinal tract of preterm and term lambs
doihttps://doi.org/10.1038/s41598-020-66056-z
sraprjna594238
mapmd50c02bcb9955b1f10e4b9a98297e0614a
datamd5a198a4675c9bb0c738aa5dc2c5821523

Annotations for experiment:

term enrichment score
TermScore
lamb0.400000
new zealand0.400000
age 6 weeks0.333333
colon0.307692
jejunum0.266667
LOWER IN colon0.200000
LOWER IN jejunum0.181818
sheep0.181818
ovis aries0.153846
duodenum0.148148
ileum0.129032
LOWER IN duodenum0.125000
LOWER IN ileum0.105263
research facility0.015625
Fraction of dbbact annotations with this term covered by the query
TermScore
colon0.333333
LOWER IN colon0.333333
LOWER IN jejunum0.250000
lamb0.250000
new zealand0.250000
jejunum0.250000
age 6 weeks0.200000
LOWER IN duodenum0.111111
sheep0.100000
duodenum0.100000
ovis aries0.083333
LOWER IN ileum0.083333
ileum0.083333
research facility0.007874
Fraction of annotations for the query sequences containing the term
TermScore
lamb1.000000
age 6 weeks1.000000
research facility1.000000
new zealand1.000000
ovis aries1.000000
sheep1.000000
colon0.285714
ileum0.285714
jejunum0.285714
duodenum0.285714
LOWER IN jejunum0.142857
LOWER IN duodenum0.142857
LOWER IN ileum0.142857
LOWER IN colon0.142857
Exp. ID User ID Description Date Region Flag Sequences
649amnondominant jejunum, lamb, age 6 weeks, research facility, new zealand, ovis aries, sheep2020-09-07v3No1 / -2
649amnondominant ileum, lamb, age 6 weeks, research facility, new zealand, ovis aries, sheep2020-09-07v3No1 / 1
649amnondominant duodenum, lamb, age 6 weeks, research facility, new zealand, ovis aries, sheep2020-09-07v3No1 / 2
649amnondominant colon, lamb, age 6 weeks, research facility, new zealand, ovis aries, sheep2020-09-07v3No1 / 5
649amnon high in jejunum duodenum compared to ileum in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 10
649amnoncommon jejunum, lamb, age 6 weeks, research facility, new zealand, ovis aries, sheep2020-09-07v3No1 / 30
649amnoncommon duodenum, lamb, age 6 weeks, research facility, new zealand, ovis aries, sheep2020-09-07v3No1 / 37
649amnoncommon ileum, lamb, age 6 weeks, research facility, new zealand, ovis aries, sheep2020-09-07v3No1 / 47
649amnon high in ileum compared to jejunum duodenum in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 84
649amnoncommon colon, lamb, age 6 weeks, research facility, new zealand, ovis aries, sheep2020-09-07v3No1 / 120
649amnon high in jejunum duodenum compared to colon in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 287
649amnon high in ileum compared to colon in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 330
649amnon high in colon compared to ileum in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 889
649amnon high in colon compared to jejunum duodenum in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 1253

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