Experiment ID: 650

Field Description
nameus nativity and dietary acculturation impact the gut microbiome in a diverse us population
doihttps://doi.org/10.1038/s41396-020-0630-6
sraprjna559143
mapmd5e99d4ac6dded7023194ad11417e5e45c
datamd5acc8b806d92b4e952aad7b4a69c36ec1

Annotations for experiment:

term enrichment score
TermScore
asian0.320000
caucasian0.240000
european0.240000
african american0.190476
state of new york0.152866
bacteroides plebeius0.133333
seaweed degrading0.133333
LOWER IN asian0.125000
LOWER IN caucasian0.117647
LOWER IN european0.117647
low bmi0.090909
LOWER IN low bmi0.090909
LOWER IN body mass index0.083333
body mass index0.083333
LOWER IN high bmi0.076923
high bmi0.076923
male0.043478
LOWER IN male0.043478
LOWER IN female0.026316
female0.026316
adult0.011489
united states of america0.008062
homo sapiens0.007351
feces0.006349
Fraction of dbbact annotations with this term covered by the query
TermScore
bacteroides plebeius0.500000
seaweed degrading0.500000
LOWER IN asian0.333333
asian0.333333
caucasian0.250000
european0.250000
LOWER IN caucasian0.250000
LOWER IN european0.250000
african american0.250000
low bmi0.111111
LOWER IN low bmi0.111111
LOWER IN body mass index0.090909
body mass index0.090909
state of new york0.083333
LOWER IN high bmi0.076923
high bmi0.076923
male0.030303
LOWER IN male0.030303
LOWER IN female0.015873
female0.015873
adult0.005780
united states of america0.004049
homo sapiens0.003690
feces0.003185
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
homo sapiens0.923077
united states of america0.923077
adult0.923077
state of new york0.923077
asian0.307692
caucasian0.230769
european0.230769
african american0.153846
LOWER IN asian0.076923
LOWER IN caucasian0.076923
LOWER IN european0.076923
male0.076923
LOWER IN female0.076923
low bmi0.076923
LOWER IN body mass index0.076923
LOWER IN high bmi0.076923
female0.076923
LOWER IN male0.076923
body mass index0.076923
high bmi0.076923
LOWER IN low bmi0.076923
bacteroides plebeius0.076923
seaweed degrading0.076923
Exp. ID User ID Description Date Region Flag Sequences
650amnonother feces, asian, bacteroides plebeius, seaweed degrading2020-09-12v4No1 / 1
650amnondominant feces, homo sapiens, united states of america, adult, state of new york, asian2020-09-09v4No1 / 18
650amnondominant feces, homo sapiens, united states of america, adult, caucasian, state of new york, european2020-09-09v4No1 / 20
650amnondominant feces, homo sapiens, united states of america, adult, african american, state of new york2020-09-09v4No1 / 22
650amnonpositively correlated with BMI ( high in body mass index high bmi compared to low bmi in feces homo sapiens united states of america adult state of new york )2020-09-09v4No1 / 26
650amnoncommon feces, homo sapiens, united states of america, adult, african american, state of new york2020-09-09v4No1 / 52
650amnoncommon feces, homo sapiens, united states of america, adult, caucasian, state of new york, european2020-09-09v4No1 / 56
650amnon high in female compared to male in feces homo sapiens united states of america adult state of new york 2020-09-10v4No1 / 57
650amnoncommon feces, homo sapiens, united states of america, adult, state of new york, asian2020-09-09v4No1 / 66
650amnonnegatively correlated with BMI ( high in low bmi compared to body mass index high bmi in feces homo sapiens united states of america adult state of new york )2020-09-09v4No1 / 75
650amnon high in male compared to female in feces homo sapiens united states of america adult state of new york 2020-09-10v4No1 / 82
650amnon high in asian compared to caucasian european in feces homo sapiens united states of america adult state of new york 2020-09-12v4No1 / 317
650amnon high in caucasian european compared to asian in feces homo sapiens united states of america adult state of new york 2020-09-12v4No1 / 475

Problems / suggestions? Please email info AT dbbact DOT org