dbBact

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Experiment ID: 652

Field	Description
name	oral microbiota perturbations are linked to high risk for rheumatoid arthritis
doi	https://doi.org/10.3389/fcimb.2019.00475
sra	prjna578951
mapmd5	3d9d2ab0c0964d8ba67c81ef50da182a
datamd5	a6194aec4ee317beb2102e9bede8d692

Annotations for experiment:

term enrichment score

Term	Score
rheumatoid arthritis	0.250000
LOWER IN rheumatoid arthritis	0.250000
sichuan province	0.181818
saliva	0.041667
china	0.010753
adult	0.010695
LOWER IN control	0.010309
control	0.010309
homo sapiens	0.006897

Fraction of dbbact annotations with this term covered by the query

Term	Score
rheumatoid arthritis	0.250000
LOWER IN rheumatoid arthritis	0.250000
sichuan province	0.100000
saliva	0.021277
china	0.005405
adult	0.005376
LOWER IN control	0.005263
control	0.005263
homo sapiens	0.003460

Fraction of annotations for the query sequences containing the term

Term	Score
sichuan province	1.000000
china	1.000000
adult	1.000000
saliva	1.000000
homo sapiens	1.000000
LOWER IN control	0.250000
rheumatoid arthritis	0.250000
LOWER IN rheumatoid arthritis	0.250000
control	0.250000

Number of experiments associating the term to the sequence

Term	Score
sichuan province	1.000000
china	1.000000
adult	1.000000
saliva	1.000000
homo sapiens	1.000000
LOWER IN control	1.000000
rheumatoid arthritis	1.000000
LOWER IN rheumatoid arthritis	1.000000
control	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
652	amnon	dominant sichuan province, china, adult, saliva, homo sapiens	2020-09-13	v3	1 / 16	approved	No
652	amnon	high in control compared to rheumatoid arthritis in sichuan province china adult saliva homo sapiens	2020-09-13	v3	1 / 31	approved	No
652	amnon	high in rheumatoid arthritis compared to control in sichuan province china adult saliva homo sapiens	2020-09-13	v3	1 / 44	approved	No
652	amnon	common sichuan province, china, adult, saliva, homo sapiens	2020-09-13	v3	1 / 166	approved	No

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