dbBact

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Experiment ID: 653

Field	Description
name	inter-personal diversity and temporal dynamics of dental, tongue, and salivary microbiota in the healthy oral cavity
doi	doi:10.1038/s41522-016-0011-0
sra	prjeb11529
mapmd5	7e3ecaa3d51d00256194c3634dcd786e
datamd5	0a0273faf30407e6ef849a08518299d4

Annotations for experiment:

term enrichment score

Term	Score
toronto	0.500000
third decade human stage	0.400000
dermal layer of tongue	0.250000
LOWER IN dermal layer of tongue	0.250000
LOWER IN supragingival dental plaque	0.200000
supragingival dental plaque	0.200000
tongue	0.181818
LOWER IN tongue	0.181818
LOWER IN supragingival plaque	0.153846
supragingival plaque	0.153846
canada	0.076923
LOWER IN dentition	0.076923
dentition	0.076923
saliva	0.040816
LOWER IN saliva	0.040816
adult	0.011494
homo sapiens	0.007353

Fraction of dbbact annotations with this term covered by the query

Term	Score
toronto	0.333333
third decade human stage	0.250000
dermal layer of tongue	0.200000
LOWER IN dermal layer of tongue	0.200000
LOWER IN supragingival dental plaque	0.142857
supragingival dental plaque	0.142857
tongue	0.125000
LOWER IN tongue	0.125000
LOWER IN supragingival plaque	0.100000
supragingival plaque	0.100000
LOWER IN dentition	0.043478
dentition	0.043478
canada	0.040000
saliva	0.021739
LOWER IN saliva	0.021739
adult	0.005780
homo sapiens	0.003690

Fraction of annotations for the query sequences containing the term

Term	Score
homo sapiens	1.000000
adult	1.000000
toronto	1.000000
canada	1.000000
third decade human stage	1.000000
tongue	0.333333
dermal layer of tongue	0.333333
LOWER IN dentition	0.333333
LOWER IN supragingival plaque	0.333333
LOWER IN supragingival dental plaque	0.333333
saliva	0.333333
dentition	0.333333
supragingival plaque	0.333333
supragingival dental plaque	0.333333
LOWER IN tongue	0.333333
LOWER IN dermal layer of tongue	0.333333
LOWER IN saliva	0.333333

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
653	amnon	high in saliva compared to tongue dermal layer of tongue in homo sapiens adult toronto canada third decade human stage	2020-09-13	v3	No	1 / 55
653	amnon	high in tongue dermal layer of tongue compared to saliva in homo sapiens adult toronto canada third decade human stage	2020-09-13	v3	No	1 / 72
653	amnon	high in dentition supragingival plaque supragingival dental plaque compared to saliva in homo sapiens adult toronto canada third decade human stage	2020-09-13	v3	No	1 / 157
653	amnon	high in dentition supragingival plaque supragingival dental plaque compared to tongue dermal layer of tongue in homo sapiens adult toronto canada third decade human stage	2020-09-13	v3	No	1 / 205
653	amnon	high in saliva compared to dentition supragingival plaque supragingival dental plaque in homo sapiens adult toronto canada third decade human stage	2020-09-13	v3	No	1 / 291
653	amnon	high in tongue dermal layer of tongue compared to dentition supragingival plaque supragingival dental plaque in homo sapiens adult toronto canada third decade human stage	2020-09-13	v3	No	1 / 306

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