Experiment ID: 658

Field Description
nameethnic variation of oral microbiota in children
doihttps://doi.org/10.1038/s41598-020-71422-y
sraprjna555622
mapmd562ce63a22ce147c2e71c720657be7f94
datamd5f9f1a74a605ae02ed5a6c13cc4ad3a1f

Annotations for experiment:

term enrichment score
TermScore
age 6 years0.666667
age 8 years0.666667
age 9 years0.666667
age 11 years0.666667
age 7 years0.500000
age 10 years0.500000
supragingival dental plaque0.400000
state of nebraska0.400000
burmese0.357143
hispanic0.307692
asian0.303030
european0.303030
hispanic or latin american0.266667
caucasian0.263158
supragingival plaque0.250000
LOWER IN burmese0.250000
african american0.235294
LOWER IN european0.222222
LOWER IN asian0.222222
LOWER IN caucasian0.200000
LOWER IN hispanic or latin american0.181818
LOWER IN hispanic0.181818
LOWER IN african american0.166667
dentition0.100000
child0.076923
homo sapiens0.010101
united states of america0.009524
Fraction of dbbact annotations with this term covered by the query
TermScore
age 6 years0.500000
age 8 years0.500000
age 9 years0.500000
age 11 years0.500000
burmese0.500000
LOWER IN hispanic or latin american0.500000
LOWER IN hispanic0.500000
hispanic0.500000
LOWER IN burmese0.500000
asian0.333333
LOWER IN european0.333333
age 7 years0.333333
age 10 years0.333333
LOWER IN african american0.333333
hispanic or latin american0.333333
european0.333333
LOWER IN asian0.333333
supragingival dental plaque0.250000
state of nebraska0.250000
LOWER IN caucasian0.250000
african american0.250000
caucasian0.250000
supragingival plaque0.142857
dentition0.052632
child0.040000
homo sapiens0.005076
united states of america0.004785
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
child1.000000
dentition1.000000
supragingival dental plaque1.000000
supragingival plaque1.000000
united states of america1.000000
state of nebraska1.000000
age 6 years1.000000
age 7 years1.000000
age 8 years1.000000
age 9 years1.000000
age 10 years1.000000
age 11 years1.000000
asian0.277778
burmese0.277778
european0.277778
caucasian0.277778
african american0.222222
hispanic or latin american0.222222
hispanic0.222222
LOWER IN european0.166667
LOWER IN caucasian0.166667
LOWER IN asian0.166667
LOWER IN burmese0.166667
LOWER IN african american0.111111
LOWER IN hispanic or latin american0.111111
LOWER IN hispanic0.111111
Exp. ID User ID Description Date Region Flag Sequences
658amnon high in european caucasian compared to african american in homo sapiens child dentition supragingival dental plaque supragingival plaque united states of america state of nebraska age 6 years age 7 years age 8 years age 9 years age 10 years age 11 years 2020-09-17v3No1 / 8
658amnon high in caucasian european compared to hispanic or latin american hispanic in age 11 years age 10 years age 9 years age 8 years age 7 years age 6 years state of nebraska united states of america supragingival plaque supragingival dental plaque dentition child homo sapiens 2020-09-17v3No1 / 8
658amnon high in african american compared to european caucasian in homo sapiens child dentition supragingival dental plaque supragingival plaque united states of america state of nebraska age 6 years age 7 years age 8 years age 9 years age 10 years age 11 years 2020-09-17v3No1 / 14
658amnon high in hispanic hispanic or latin american compared to asian burmese in homo sapiens child dentition supragingival dental plaque supragingival plaque united states of america state of nebraska age 6 years age 7 years age 8 years age 9 years age 10 years age 11 years 2020-09-17v3No1 / 14
658amnondominant asian, burmese, homo sapiens, child, dentition, supragingival dental plaque, supragingival plaque, united states of america, state of nebraska, age 6 years, age 7 years, age 8 years, age 9 years, age 10 years, age 11 years2020-09-17v3No1 / 16
658amnondominant hispanic or latin american, hispanic, homo sapiens, child, dentition, supragingival dental plaque, supragingival plaque, united states of america, state of nebraska, age 6 years, age 7 years, age 8 years, age 9 years, age 10 years, age 11 years2020-09-17v3No1 / 20
658amnon high in hispanic hispanic or latin american compared to european caucasian in age 11 years age 10 years age 9 years age 8 years age 7 years age 6 years state of nebraska united states of america supragingival plaque supragingival dental plaque dentition child homo sapiens 2020-09-17v3No1 / 20
658amnondominant african american, homo sapiens, child, dentition, supragingival dental plaque, supragingival plaque, united states of america, state of nebraska, age 6 years, age 7 years, age 8 years, age 9 years, age 10 years, age 11 years2020-09-17v3No1 / 21
658amnondominant european, caucasian, homo sapiens, child, dentition, supragingival dental plaque, supragingival plaque, united states of america, state of nebraska, age 6 years, age 7 years, age 8 years, age 9 years, age 10 years, age 11 years2020-09-17v3No1 / 22
658amnon high in african american compared to asian burmese in homo sapiens child dentition supragingival dental plaque supragingival plaque united states of america state of nebraska age 6 years age 7 years age 8 years age 9 years age 10 years age 11 years 2020-09-17v3No1 / 28
658amnon high in european caucasian compared to asian burmese in homo sapiens child dentition supragingival dental plaque supragingival plaque united states of america state of nebraska age 6 years age 7 years age 8 years age 9 years age 10 years age 11 years 2020-09-17v3No1 / 29
658amnoncommon european, caucasian, homo sapiens, child, dentition, supragingival dental plaque, supragingival plaque, united states of america, state of nebraska, age 6 years, age 7 years, age 8 years, age 9 years, age 10 years, age 11 years2020-09-17v3No1 / 81
658amnoncommon hispanic or latin american, hispanic, homo sapiens, child, dentition, supragingival dental plaque, supragingival plaque, united states of america, state of nebraska, age 6 years, age 7 years, age 8 years, age 9 years, age 10 years, age 11 years2020-09-17v3No1 / 92
658amnoncommon african american, homo sapiens, child, dentition, supragingival dental plaque, supragingival plaque, united states of america, state of nebraska, age 6 years, age 7 years, age 8 years, age 9 years, age 10 years, age 11 years2020-09-17v3No1 / 97
658amnon high in asian burmese compared to hispanic or latin american hispanic in homo sapiens child dentition supragingival dental plaque supragingival plaque united states of america state of nebraska age 6 years age 7 years age 8 years age 9 years age 10 years age 11 years 2020-09-17v3No1 / 117
658amnoncommon asian, burmese, homo sapiens, child, dentition, supragingival dental plaque, supragingival plaque, united states of america, state of nebraska, age 6 years, age 7 years, age 8 years, age 9 years, age 10 years, age 11 years2020-09-17v3No1 / 156
658amnon high in asian burmese compared to african american in homo sapiens child dentition supragingival dental plaque supragingival plaque united states of america state of nebraska age 6 years age 7 years age 8 years age 9 years age 10 years age 11 years 2020-09-17v3No1 / 165
658amnon high in asian burmese compared to european caucasian in homo sapiens child dentition supragingival dental plaque supragingival plaque united states of america state of nebraska age 6 years age 7 years age 8 years age 9 years age 10 years age 11 years 2020-09-17v3No1 / 211

Problems / suggestions? Please email info AT dbbact DOT org