Experiment ID: 663

Field Description
nameobesity and disease severity magnify disturbed microbiome-immune interactions in asthma patients
doihttps://doi.org/10.1038/s41467-019-13751-9
sraprjna434133
mapmd5cc1907b31090604f709d46eabe841424
datamd59768d49261a177bbb88a124245b4bf60

Annotations for experiment:

term enrichment score
TermScore
obese body mass index status0.263158
obesity0.188679
switzerland0.172840
low bmi0.158730
poland0.139037
oral wash0.125000
bronchoalveolar lavage0.125000
lung0.105263
nasal cavity0.100000
LOWER IN obese body mass index status0.090909
pair of nares0.086957
LOWER IN obesity0.080000
LOWER IN switzerland0.074074
LOWER IN low bmi0.074074
LOWER IN poland0.064516
high bmi0.064516
LOWER IN high bmi0.064516
mouth0.060606
adult0.011494
homo sapiens0.007353
feces0.006339
Fraction of dbbact annotations with this term covered by the query
TermScore
obese body mass index status0.250000
LOWER IN obese body mass index status0.250000
obesity0.142857
oral wash0.142857
bronchoalveolar lavage0.142857
LOWER IN obesity0.142857
low bmi0.111111
switzerland0.111111
LOWER IN switzerland0.111111
LOWER IN low bmi0.111111
lung0.100000
nasal cavity0.090909
poland0.076923
LOWER IN poland0.076923
high bmi0.076923
LOWER IN high bmi0.076923
pair of nares0.071429
mouth0.041667
adult0.005780
homo sapiens0.003690
feces0.003185
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
adult1.000000
poland0.722222
feces0.666667
switzerland0.388889
obesity0.277778
obese body mass index status0.277778
low bmi0.277778
oral wash0.111111
mouth0.111111
lung0.111111
bronchoalveolar lavage0.111111
nasal cavity0.111111
pair of nares0.111111
LOWER IN poland0.055556
LOWER IN switzerland0.055556
high bmi0.055556
LOWER IN low bmi0.055556
LOWER IN obesity0.055556
LOWER IN obese body mass index status0.055556
LOWER IN high bmi0.055556
Exp. ID User ID Description Date Region Flag Sequences
663amnondominant homo sapiens, lung, bronchoalveolar lavage, adult, poland2020-09-22v4No1 / 7
663amnondominant homo sapiens, nasal cavity, pair of nares, adult, poland2020-09-22v4No1 / 16
663amnondominant feces, homo sapiens, adult, switzerland, low bmi2020-09-22v4No1 / 17
663amnondominant homo sapiens, adult, poland, oral wash, mouth2020-09-22v4No1 / 18
663amnondominant feces, homo sapiens, adult, poland, low bmi2020-09-22v4No1 / 18
663amnondominant feces, homo sapiens, obesity, adult, obese body mass index status, poland2020-09-22v4No1 / 18
663amnondominant feces, homo sapiens, obesity, adult, obese body mass index status, switzerland2020-09-22v4No1 / 20
663amnon high in low bmi compared to obesity obese body mass index status high bmi in feces homo sapiens adult poland switzerland 2020-09-22v4No1 / 21
663amnoncommon homo sapiens, nasal cavity, pair of nares, adult, poland2020-09-22v4No1 / 25
663amnon high in obesity obese body mass index status high bmi compared to low bmi in feces homo sapiens adult poland switzerland 2020-09-22v4No1 / 44
663amnoncommon feces, homo sapiens, obesity, adult, obese body mass index status, switzerland2020-09-22v4No1 / 71
663amnon high in poland compared to switzerland in feces homo sapiens adult 2020-09-22v4No1 / 72
663amnon high in switzerland compared to poland in feces homo sapiens adult 2020-09-22v4No1 / 76
663amnoncommon homo sapiens, lung, bronchoalveolar lavage, adult, poland2020-09-22v4No1 / 84
663amnoncommon feces, homo sapiens, adult, switzerland, low bmi2020-09-22v4No1 / 85
663amnoncommon feces, homo sapiens, adult, poland, low bmi2020-09-22v4No1 / 98
663amnoncommon homo sapiens, adult, poland, oral wash, mouth2020-09-22v4No1 / 106
663amnoncommon feces, homo sapiens, obesity, adult, obese body mass index status, poland2020-09-22v4No1 / 112

Problems / suggestions? Please email info AT dbbact DOT org