Experiment ID: 671

Field Description
namematuration of the infant rhesus macaque gut microbiome and its role in the development of diarrheal disease
doihttps://doi.org/10.1186/s13059-019-1789-x
sraprjna546004
mapmd5179be4453a51ed6c0a825b4db306bea2
datamd58cddf79ccc74191a0cb33714744ddfa9

Annotations for experiment:

term enrichment score
TermScore
rhesus macaque0.666667
age 8 months0.333333
macaca mulatta0.285714
LOWER IN state of california0.250000
LOWER IN state of oregon0.250000
age 1 month0.204082
monkey0.181818
age 3 months0.181818
state of oregon0.166667
age 6 months0.166667
LOWER IN age 8 months0.142857
LOWER IN age 3 months0.111111
captive0.111111
LOWER IN age 6 months0.076923
LOWER IN age 1 month0.074074
state of california0.066667
LOWER IN female0.042553
LOWER IN adult0.042553
female0.030395
research facility0.013889
adult0.011848
united states of america0.008264
feces0.006579
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN age 6 months0.500000
age 8 months0.500000
rhesus macaque0.500000
LOWER IN age 8 months0.500000
LOWER IN state of california0.500000
LOWER IN state of oregon0.500000
LOWER IN age 1 month0.333333
age 6 months0.250000
age 1 month0.200000
LOWER IN age 3 months0.166667
macaca mulatta0.166667
state of oregon0.166667
age 3 months0.142857
monkey0.100000
captive0.058824
LOWER IN female0.043478
LOWER IN adult0.043478
state of california0.041667
female0.016393
research facility0.006993
adult0.006098
united states of america0.004149
feces0.003300
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
monkey1.000000
rhesus macaque1.000000
macaca mulatta1.000000
research facility1.000000
captive1.000000
feces1.000000
age 8 months0.250000
age 3 months0.250000
female0.208333
adult0.208333
age 1 month0.208333
LOWER IN state of california0.166667
state of oregon0.166667
LOWER IN state of oregon0.166667
state of california0.166667
age 6 months0.125000
LOWER IN age 3 months0.083333
LOWER IN age 8 months0.083333
LOWER IN age 6 months0.041667
LOWER IN age 1 month0.041667
LOWER IN female0.041667
LOWER IN adult0.041667
Exp. ID User ID Description Date Region Flag Sequences
671amnondominant female, adult, united states of america, monkey, rhesus macaque, macaca mulatta, research facility, captive, feces2020-09-27v4No1 / 15
671amnondominant age 6 months, united states of america, monkey, rhesus macaque, macaca mulatta, research facility, captive, feces2020-09-27v4No1 / 18
671amnondominant age 8 months, united states of america, monkey, rhesus macaque, macaca mulatta, research facility, captive, feces2020-09-27v4No1 / 19
671amnondominant age 1 month, united states of america, monkey, rhesus macaque, macaca mulatta, research facility, captive, feces2020-09-27v4No1 / 20
671amnondominant age 3 months, united states of america, monkey, rhesus macaque, macaca mulatta, research facility, captive, feces2020-09-27v4No1 / 21
671amnon high in state of oregon compared to state of california in age 3 months united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 38
671amnon high in state of california compared to state of oregon in age 3 months united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 52
671amnon high in age 1 month compared to age 3 months in united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-28v4No1 / 64
671amnon high in state of california compared to state of oregon in age 8 months united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 66
671amnon high in age 6 months age 3 months compared to age 8 months in united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-28v4No1 / 79
671amnoncommon age 1 month, united states of america, monkey, rhesus macaque, macaca mulatta, research facility, captive, feces2020-09-27v4No1 / 81
671amnoncommon age 6 months, united states of america, monkey, rhesus macaque, macaca mulatta, research facility, captive, feces2020-09-27v4No1 / 117
671amnon high in state of oregon compared to state of california in age 1 month united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 140
671amnoncommon age 3 months, united states of america, monkey, rhesus macaque, macaca mulatta, research facility, captive, feces2020-09-27v4No1 / 170
671amnon high in age 8 months compared to female adult in united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 182
671amnon high in state of california compared to state of oregon in age 1 month united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 217
671amnon high in state of oregon compared to state of california in age 8 months united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 232
671amnoncommon age 8 months, united states of america, monkey, rhesus macaque, macaca mulatta, research facility, captive, feces2020-09-27v4No1 / 252
671amnon high in state of california compared to state of oregon in female adult united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 355
671amnoncommon female, adult, united states of america, monkey, rhesus macaque, macaca mulatta, research facility, captive, feces2020-09-27v4No1 / 356
671amnon high in state of oregon compared to state of california in female adult united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 534
671amnon high in age 3 months compared to age 1 month in united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-28v4No1 / 714
671amnon high in female adult compared to age 8 months in united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-27v4No1 / 947
671amnon high in age 8 months compared to age 6 months age 3 months in united states of america monkey rhesus macaque macaca mulatta research facility captive feces 2020-09-28v4No1 / 955

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