Experiment ID: 676

Field Description
namecharacterization of the marine aquaculture microbiome: a seasonal survey in a seabass farm
doihttps://doi.org/10.1016/j.aquaculture.2020.735987
sraprjna613386
mapmd5e0799d740c2ef19a49973e3a9a64e759
datamd57d586f3ebd7d0afcdc26bdb29db4ce13

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN saline water biofilm0.500000
LOWER IN biofilm0.500000
english channel coastal waters of france0.500000
saline water biofilm0.500000
biofilm0.500000
LOWER IN water inlet0.500000
LOWER IN cold water inlet0.500000
hot water inlet0.500000
water inlet0.500000
LOWER IN hot water inlet0.500000
cold water inlet0.500000
fish farm0.250000
LOWER IN spring0.250000
spring0.250000
aquarium0.200000
LOWER IN saline water0.200000
LOWER IN autumn0.166667
french republic0.111111
LOWER IN sea water0.111111
saline water0.100000
autumn0.090909
LOWER IN summer0.050000
sea water0.031250
Fraction of annotations for the query sequences containing the term
TermScore
french republic1.000000
english channel coastal waters of france1.000000
saline water0.785714
sea water0.785714
aquarium0.571429
fish farm0.571429
water inlet0.428571
saline water biofilm0.214286
biofilm0.214286
LOWER IN water inlet0.142857
LOWER IN summer0.142857
LOWER IN saline water biofilm0.071429
LOWER IN biofilm0.071429
LOWER IN saline water0.071429
LOWER IN sea water0.071429
LOWER IN cold water inlet0.071429
hot water inlet0.071429
LOWER IN hot water inlet0.071429
cold water inlet0.071429
LOWER IN spring0.071429
autumn0.071429
LOWER IN autumn0.071429
spring0.071429
Exp. ID User ID Description Date Region Flag Sequences
676amnondominant saline water biofilm, biofilm, aquarium, fish farm, french republic, english channel coastal waters of france2028-02-27v4No1 / 6
676amnondominant water inlet, english channel coastal waters of france, saline water, sea water, french republic2028-02-27v4No1 / 12
676amnondominant aquarium, fish farm, french republic, sea water, saline water, english channel coastal waters of france2028-02-27v4No1 / 14
676amnon high in spring compared to autumn summer in french republic sea water saline water english channel coastal waters of france water inlet 2028-02-27v4No1 / 94
676amnon high in autumn compared to summer spring in french republic sea water saline water english channel coastal waters of france water inlet 2028-02-27v4No1 / 102
676amnoncommon water inlet, english channel coastal waters of france, saline water, sea water, french republic2028-02-27v4No1 / 390
676amnon high in cold water inlet compared to hot water inlet in water inlet english channel coastal waters of france saline water sea water french republic 2028-02-27v4No1 / 399
676amnoncommon aquarium, fish farm, french republic, sea water, saline water, english channel coastal waters of france2028-02-27v4No1 / 465
676amnon high in hot water inlet compared to cold water inlet in water inlet english channel coastal waters of france saline water sea water french republic 2028-02-27v4No1 / 551
676amnoncommon saline water biofilm, biofilm, aquarium, fish farm, french republic, english channel coastal waters of france2028-02-27v4No1 / 567
676amnon high in aquarium fish farm compared to water inlet in french republic sea water saline water english channel coastal waters of france 2028-02-27v4No1 / 3012
676amnon high in fish farm aquarium compared to water inlet in french republic sea water saline water english channel coastal waters of france 2028-02-27v4No1 / 3729
676amnon high in saline water biofilm biofilm compared to saline water sea water in aquarium fish farm french republic english channel coastal waters of france 2028-02-27v4No1 / 3904
676amnon high in saline water sea water compared to saline water biofilm biofilm in aquarium fish farm french republic english channel coastal waters of france 2028-02-27v4No1 / 4350

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