Experiment ID: 676

Field Description
namecharacterization of the marine aquaculture microbiome: a seasonal survey in a seabass farm
doihttps://doi.org/10.1016/j.aquaculture.2020.735987
sraprjna613386
mapmd5e0799d740c2ef19a49973e3a9a64e759
datamd57d586f3ebd7d0afcdc26bdb29db4ce13

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN spring1.000000
spring1.000000
LOWER IN saline water biofilm0.500000
english channel coastal waters of france0.500000
saline water biofilm0.500000
LOWER IN water inlet0.500000
hot water inlet0.500000
LOWER IN cold water inlet0.500000
water inlet0.500000
cold water inlet0.500000
LOWER IN hot water inlet0.500000
fish farm0.200000
aquarium0.166667
LOWER IN biofilm0.142857
biofilm0.142857
french republic0.076923
autumn0.076923
LOWER IN autumn0.076923
LOWER IN summer0.043478
sea water0.028571
LOWER IN sea water0.028571
saline water0.024390
LOWER IN saline water0.024390
Fraction of annotations for the query sequences containing the term
TermScore
french republic1.000000
english channel coastal waters of france1.000000
saline water0.785714
sea water0.785714
fish farm0.571429
aquarium0.571429
biofilm0.428571
water inlet0.428571
saline water biofilm0.214286
LOWER IN biofilm0.142857
LOWER IN water inlet0.142857
LOWER IN summer0.142857
LOWER IN saline water biofilm0.071429
LOWER IN saline water0.071429
LOWER IN sea water0.071429
hot water inlet0.071429
LOWER IN cold water inlet0.071429
cold water inlet0.071429
LOWER IN hot water inlet0.071429
autumn0.071429
LOWER IN spring0.071429
spring0.071429
LOWER IN autumn0.071429
Exp. ID User ID Description Date Region Flag Sequences
676amnondominant fish farm, biofilm, aquarium, french republic, biofilm, english channel coastal waters of france, saline water biofilm2028-02-27v4No1 / 6
676amnondominant saline water, sea water, french republic, english channel coastal waters of france, water inlet2028-02-27v4No1 / 12
676amnondominant fish farm, saline water, sea water, aquarium, french republic, english channel coastal waters of france2028-02-27v4No1 / 14
676amnon high in spring compared to summer autumn in saline water sea water french republic english channel coastal waters of france water inlet 2028-02-27v4No1 / 94
676amnon high in autumn compared to summer spring in saline water sea water french republic english channel coastal waters of france water inlet 2028-02-27v4No1 / 102
676amnoncommon saline water, sea water, french republic, english channel coastal waters of france, water inlet2028-02-27v4No1 / 390
676amnon high in cold water inlet compared to hot water inlet in saline water sea water french republic english channel coastal waters of france water inlet 2028-02-27v4No1 / 399
676amnoncommon fish farm, saline water, sea water, aquarium, french republic, english channel coastal waters of france2028-02-27v4No1 / 465
676amnon high in hot water inlet compared to cold water inlet in saline water sea water french republic english channel coastal waters of france water inlet 2028-02-27v4No1 / 551
676amnoncommon fish farm, biofilm, aquarium, french republic, biofilm, english channel coastal waters of france, saline water biofilm2028-02-27v4No1 / 567
676amnon high in fish farm aquarium compared to water inlet in saline water sea water french republic english channel coastal waters of france 2028-02-27v4No1 / 3012
676amnon high in fish farm aquarium compared to water inlet in saline water sea water french republic english channel coastal waters of france 2028-02-27v4No1 / 3729
676amnon high in biofilm biofilm saline water biofilm compared to saline water sea water in fish farm aquarium french republic english channel coastal waters of france 2028-02-27v4No1 / 3904
676amnon high in saline water sea water compared to biofilm biofilm saline water biofilm in fish farm aquarium french republic english channel coastal waters of france 2028-02-27v4No1 / 4350

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