Experiment ID: 676

Field Description
namecharacterization of the marine aquaculture microbiome: a seasonal survey in a seabass farm
sraprjna613386
doihttps://doi.org/10.1016/j.aquaculture.2020.735987
datamd57d586f3ebd7d0afcdc26bdb29db4ce13
mapmd5e0799d740c2ef19a49973e3a9a64e759

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN saline water biofilm0.500000
english channel coastal waters of france0.500000
saline water biofilm0.500000
LOWER IN water inlet0.500000
hot water inlet0.500000
LOWER IN cold water inlet0.500000
water inlet0.500000
cold water inlet0.500000
LOWER IN hot water inlet0.500000
aquarium0.200000
LOWER IN saline water0.200000
fish farm0.166667
LOWER IN biofilm0.125000
LOWER IN autumn0.111111
LOWER IN spring0.090909
saline water0.076923
LOWER IN sea water0.076923
biofilm0.071429
autumn0.071429
spring0.071429
french republic0.066667
LOWER IN summer0.038462
sea water0.023810
Fraction of annotations for the query sequences containing the term
TermScore
french republic1.000000
english channel coastal waters of france1.000000
saline water0.785714
sea water0.785714
fish farm0.571429
aquarium0.571429
biofilm0.428571
water inlet0.428571
saline water biofilm0.214286
LOWER IN biofilm0.142857
LOWER IN water inlet0.142857
LOWER IN summer0.142857
LOWER IN saline water biofilm0.071429
LOWER IN saline water0.071429
LOWER IN sea water0.071429
hot water inlet0.071429
LOWER IN cold water inlet0.071429
cold water inlet0.071429
LOWER IN hot water inlet0.071429
autumn0.071429
LOWER IN spring0.071429
spring0.071429
LOWER IN autumn0.071429
Number of experiments associating the term to the sequence
TermScore
saline water1.000000
sea water1.000000
LOWER IN biofilm1.000000
LOWER IN saline water biofilm1.000000
fish farm1.000000
aquarium1.000000
french republic1.000000
english channel coastal waters of france1.000000
biofilm1.000000
saline water biofilm1.000000
LOWER IN saline water1.000000
LOWER IN sea water1.000000
LOWER IN water inlet1.000000
hot water inlet1.000000
LOWER IN cold water inlet1.000000
water inlet1.000000
cold water inlet1.000000
LOWER IN hot water inlet1.000000
autumn1.000000
LOWER IN summer1.000000
LOWER IN spring1.000000
spring1.000000
LOWER IN autumn1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
676amnondominant fish farm, biofilm, aquarium, french republic, biofilm, english channel coastal waters of france, saline water biofilm2028-02-27v41 / 6approvedNo
676amnondominant saline water, sea water, french republic, english channel coastal waters of france, water inlet2028-02-27v41 / 12approvedNo
676amnondominant fish farm, saline water, sea water, aquarium, french republic, english channel coastal waters of france2028-02-27v41 / 14approvedNo
676amnon high in spring compared to summer autumn in saline water sea water french republic english channel coastal waters of france water inlet 2028-02-27v41 / 94approvedNo
676amnon high in autumn compared to summer spring in saline water sea water french republic english channel coastal waters of france water inlet 2028-02-27v41 / 102approvedNo
676amnoncommon saline water, sea water, french republic, english channel coastal waters of france, water inlet2028-02-27v41 / 390approvedNo
676amnon high in cold water inlet compared to hot water inlet in saline water sea water french republic english channel coastal waters of france water inlet 2028-02-27v41 / 399approvedNo
676amnoncommon fish farm, saline water, sea water, aquarium, french republic, english channel coastal waters of france2028-02-27v41 / 465approvedNo
676amnon high in hot water inlet compared to cold water inlet in saline water sea water french republic english channel coastal waters of france water inlet 2028-02-27v41 / 551approvedNo
676amnoncommon fish farm, biofilm, aquarium, french republic, biofilm, english channel coastal waters of france, saline water biofilm2028-02-27v41 / 567approvedNo
676amnon high in fish farm aquarium compared to water inlet in saline water sea water french republic english channel coastal waters of france 2028-02-27v41 / 3012approvedNo
676amnon high in fish farm aquarium compared to water inlet in saline water sea water french republic english channel coastal waters of france 2028-02-27v41 / 3729approvedNo
676amnon high in biofilm biofilm saline water biofilm compared to saline water sea water in fish farm aquarium french republic english channel coastal waters of france 2028-02-27v41 / 3904approvedNo
676amnon high in saline water sea water compared to biofilm biofilm saline water biofilm in fish farm aquarium french republic english channel coastal waters of france 2028-02-27v41 / 4350approvedNo

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