dbBact

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Experiment ID: 680

Field	Description
name	human gut microbiome response to short-term bifidobacterium-based probiotic treatment
doi	https://doi.org/10.1007/s12088-020-00888-1
sra	srp194142
mapmd5	54f49577b6acaeed88d8424e4f2e0352
datamd5	a041c450fb7e33e3174cc72efc472327

Annotations for experiment:

term enrichment score

Term	Score
novosibirsk	0.666667
bifidobacterium longum probiotic	0.400000
probiotic	0.333333
russia	0.166667
obesity	0.142857
adult	0.010695
LOWER IN control	0.010363
homo sapiens	0.006897
feces	0.005780

Fraction of dbbact annotations with this term covered by the query

Term	Score
novosibirsk	0.500000
bifidobacterium longum probiotic	0.500000
probiotic	0.333333
russia	0.090909
obesity	0.076923
adult	0.005376
LOWER IN control	0.005263
homo sapiens	0.003460
feces	0.002899

Fraction of annotations for the query sequences containing the term

Term	Score
obesity	1.000000
adult	1.000000
novosibirsk	1.000000
russia	1.000000
feces	1.000000
homo sapiens	1.000000
LOWER IN control	0.333333
bifidobacterium longum probiotic	0.333333
probiotic	0.333333

Number of experiments associating the term to the sequence

Term	Score
obesity	1.000000
adult	1.000000
novosibirsk	1.000000
russia	1.000000
feces	1.000000
homo sapiens	1.000000
LOWER IN control	1.000000
bifidobacterium longum probiotic	1.000000
probiotic	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
680	amnon	high in bifidobacterium longum probiotic probiotic compared to control in obesity adult novosibirsk russia feces homo sapiens	2028-03-04	v3	1 / 1	approved	No
680	amnon	dominant obesity, adult, novosibirsk, russia, feces, homo sapiens	2028-03-04	v3	1 / 16	approved	No
680	amnon	common obesity, adult, novosibirsk, russia, feces, homo sapiens	2028-03-04	v3	1 / 85	approved	No

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