dbBact

×

Experiment ID: 693

Field	Description
name	alterations in gut microbiome composition and barrier function are associated with reproductive and metabolic defects in women with polycystic ovary syndrome (pcos): a pilot study
doi	https://doi.org/10.1371/journal.pone.0168390
sra	prjna326866
sra	srp077213
mapmd5	cff047fec99149a55bb418bc84f76a74
datamd5	4796f3b111db364213f9d8508cff4f89

Annotations for experiment:

term enrichment score

Term	Score
graz city district	0.400000
polycystic ovary syndrome	0.333333
LOWER IN polycystic ovary syndrome	0.285714
austria	0.200000
female	0.028169
LOWER IN control	0.010000
control	0.009756
adult	0.009662
homo sapiens	0.006173
feces	0.005208

Fraction of dbbact annotations with this term covered by the query

Term	Score
polycystic ovary syndrome	0.500000
LOWER IN polycystic ovary syndrome	0.333333
graz city district	0.250000
austria	0.111111
female	0.014286
LOWER IN control	0.005102
control	0.004975
adult	0.004854
homo sapiens	0.003096
feces	0.002611

Fraction of annotations for the query sequences containing the term

Term	Score
graz city district	1.000000
austria	1.000000
adult	1.000000
feces	1.000000
homo sapiens	1.000000
female	1.000000
LOWER IN control	0.250000
polycystic ovary syndrome	0.250000
LOWER IN polycystic ovary syndrome	0.250000
control	0.250000

Number of experiments associating the term to the sequence

Term	Score
graz city district	1.000000
austria	1.000000
adult	1.000000
feces	1.000000
homo sapiens	1.000000
female	1.000000
LOWER IN control	1.000000
polycystic ovary syndrome	1.000000
LOWER IN polycystic ovary syndrome	1.000000
control	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
693	amnon	high in control compared to polycystic ovary syndrome in graz city district austria adult feces homo sapiens female	2028-03-16	v1	1 / 9	approved	No
693	amnon	dominant graz city district, austria, adult, feces, homo sapiens, female	2028-03-16	v1	1 / 14	approved	No
693	amnon	high in polycystic ovary syndrome compared to control in graz city district austria adult feces homo sapiens female	2028-03-16	v1	1 / 29	approved	No
693	amnon	common graz city district, austria, adult, feces, homo sapiens, female	2028-03-16	v1	1 / 104	approved	No

Problems / suggestions? Please email info AT dbbact DOT org