Experiment ID: 700

Field Description
nameantibiotic affects the gut microbiota composition and expression of genes related to lipid metabolism and myofiber types in skeletal muscle of piglets
srasrp130427
sraprjna430317
doihttps://doi.org/10.1186/s12917-020-02592-0
datamd5b5ee83a031f0f5a2dfd1c36db67bb94e
mapmd565734389c687e7ce12d3502925d78fcd

Annotations for experiment:

term enrichment score
TermScore
LOWER IN tylosin phosphate0.333333
tylosin phosphate0.333333
age 1 month0.285714
age 2 months0.240000
belgium0.200000
sus scrofa0.111111
pig0.111111
LOWER IN antibiotic0.090909
antibiotic0.083333
colon0.081301
LOWER IN colon0.076923
LOWER IN caecum0.074074
caecum0.035088
research facility0.010638
LOWER IN control0.009346
control0.009217
feces0.004706
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN tylosin phosphate0.500000
tylosin phosphate0.500000
age 1 month0.333333
age 2 months0.142857
belgium0.111111
sus scrofa0.058824
pig0.058824
LOWER IN antibiotic0.055556
LOWER IN colon0.055556
LOWER IN caecum0.052632
antibiotic0.050000
colon0.043478
caecum0.020408
research facility0.005348
LOWER IN control0.004762
control0.004651
feces0.002375
Fraction of annotations for the query sequences containing the term
TermScore
research facility1.000000
sus scrofa1.000000
belgium1.000000
pig1.000000
age 2 months0.750000
colon0.625000
control0.500000
feces0.250000
age 1 month0.250000
LOWER IN antibiotic0.250000
LOWER IN tylosin phosphate0.250000
antibiotic0.250000
tylosin phosphate0.250000
LOWER IN control0.250000
LOWER IN caecum0.125000
caecum0.125000
LOWER IN colon0.125000
Number of experiments associating the term to the sequence
TermScore
feces1.000000
research facility1.000000
sus scrofa1.000000
belgium1.000000
age 1 month1.000000
pig1.000000
colon1.000000
LOWER IN caecum1.000000
control1.000000
age 2 months1.000000
LOWER IN antibiotic1.000000
LOWER IN tylosin phosphate1.000000
caecum1.000000
LOWER IN colon1.000000
antibiotic1.000000
tylosin phosphate1.000000
LOWER IN control1.000000

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