Experiment ID: 702

Field Description
namec. difficile carriage in animals and the associated changes in the host fecal microbiota
doihttps://doi.org/10.1016/j.anaerobe.2020.102279
sraprjna562547
mapmd55b481d903907ab874c73ae1f896943db
datamd5744a976ca3ee602c19f4d2c38f3219a3

Annotations for experiment:

term enrichment score
TermScore
state of north carolina0.285714
cat0.181818
felis catus0.153846
equus caballus0.133333
horse0.133333
sheep0.125000
clostridium difficile infection0.125000
LOWER IN clostridium difficile infection0.125000
ovis aries0.111111
LOWER IN cat0.105263
LOWER IN felis catus0.095238
dog0.078740
canis lupus familiaris0.070423
LOWER IN dog0.057143
LOWER IN canis lupus familiaris0.052632
LOWER IN control0.010152
control0.010152
united states of america0.008065
feces0.006349
Fraction of dbbact annotations with this term covered by the query
TermScore
clostridium difficile infection0.250000
LOWER IN clostridium difficile infection0.250000
state of north carolina0.166667
cat0.142857
LOWER IN cat0.142857
equus caballus0.111111
horse0.111111
felis catus0.111111
LOWER IN felis catus0.111111
sheep0.100000
ovis aries0.083333
LOWER IN dog0.043478
dog0.043478
LOWER IN canis lupus familiaris0.038462
canis lupus familiaris0.038462
LOWER IN control0.005405
control0.005405
united states of america0.004049
feces0.003185
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
united states of america1.000000
state of north carolina1.000000
canis lupus familiaris0.416667
dog0.416667
felis catus0.250000
cat0.250000
ovis aries0.166667
sheep0.166667
equus caballus0.166667
horse0.166667
LOWER IN canis lupus familiaris0.083333
LOWER IN dog0.083333
LOWER IN felis catus0.083333
LOWER IN cat0.083333
clostridium difficile infection0.083333
LOWER IN control0.083333
control0.083333
LOWER IN clostridium difficile infection0.083333
Exp. ID User ID Description Date Region Flag Sequences
702amnon high in control compared to clostridium difficile infection in feces united states of america canis lupus familiaris state of north carolina dog 2028-04-02v4No1 / 1
702amnondominant feces, united states of america, equus caballus, state of north carolina, horse2028-04-02v4No1 / 2
702amnon high in clostridium difficile infection compared to control in feces united states of america canis lupus familiaris state of north carolina dog 2028-04-02v4No1 / 6
702amnon high in canis lupus familiaris dog compared to felis catus cat in feces united states of america state of north carolina 2028-04-02v4No1 / 8
702amnondominant feces, united states of america, ovis aries, state of north carolina, sheep2028-04-02v4No1 / 11
702amnoncommon feces, united states of america, canis lupus familiaris, state of north carolina, dog2028-04-02v4No1 / 15
702amnondominant feces, united states of america, canis lupus familiaris, state of north carolina, dog2028-04-02v4No1 / 23
702amnondominant feces, united states of america, felis catus, state of north carolina, cat2028-04-02v4No1 / 24
702amnoncommon feces, united states of america, felis catus, state of north carolina, cat2028-04-02v4No1 / 51
702amnon high in felis catus cat compared to canis lupus familiaris dog in feces united states of america state of north carolina 2028-04-02v4No1 / 100
702amnoncommon feces, united states of america, equus caballus, state of north carolina, horse2028-04-02v4No1 / 207
702amnoncommon feces, united states of america, ovis aries, state of north carolina, sheep2028-04-02v4No1 / 450

Problems / suggestions? Please email info AT dbbact DOT org