dbBact

Field	Description
name	bacterial community composition and dynamics spanning five years in freshwater bog lakes
doi	https://doi.org/10.1128/msphere.00169-17
qiita	1288
sra	prjeb15148
mapmd5	3a2f967b3c7449112e76899f3b8e60db
datamd5	3b143e082d342a15767c9cf1172698ae

term enrichment score

Term	Score
bog lake	0.666667
hypolimnion	0.500000
epilimnion	0.500000
ph 4.5-5	0.500000
dimictic lake	0.428571
polymictic lake	0.428571
state of wisconsin	0.400000
freshwater lake	0.333333
meromictic lake	0.333333
LOWER IN epilimnion	0.250000
LOWER IN hypolimnion	0.250000
"mary lake"	0.200000
"hells kitchen" lake	0.200000
"trout bog" lake	0.200000
"south sparkling bog" lake	0.200000
"north sparkling bog" lake	0.200000
"crystal bog" lake	0.200000
"west sparkling bog" lake	0.200000
ph 5-5.5	0.200000
"forestry bog" lake	0.200000
ph 5.5-6	0.181818
ph 4-4.5	0.166667
united states of america	0.007067

Fraction of dbbact annotations with this term covered by the query

Term	Score
hypolimnion	0.500000
LOWER IN epilimnion	0.500000
"mary lake"	0.500000
meromictic lake	0.500000
bog lake	0.500000
LOWER IN hypolimnion	0.500000
epilimnion	0.500000
"hells kitchen" lake	0.500000
"trout bog" lake	0.500000
ph 4.5-5	0.500000
dimictic lake	0.500000
"south sparkling bog" lake	0.500000
"north sparkling bog" lake	0.500000
"crystal bog" lake	0.500000
polymictic lake	0.500000
"west sparkling bog" lake	0.500000
ph 5-5.5	0.500000
"forestry bog" lake	0.500000
ph 5.5-6	0.333333
state of wisconsin	0.250000
ph 4-4.5	0.250000
freshwater lake	0.200000
united states of america	0.003546

Fraction of annotations for the query sequences containing the term

Term	Score
freshwater lake	1.000000
bog lake	1.000000
united states of america	1.000000
state of wisconsin	1.000000
hypolimnion	0.500000
epilimnion	0.500000
ph 4.5-5	0.500000
dimictic lake	0.375000
polymictic lake	0.375000
meromictic lake	0.250000
LOWER IN epilimnion	0.166667
LOWER IN hypolimnion	0.166667
"mary lake"	0.125000
ph 5.5-6	0.125000
"hells kitchen" lake	0.125000
"trout bog" lake	0.125000
"south sparkling bog" lake	0.125000
"north sparkling bog" lake	0.125000
"crystal bog" lake	0.125000
ph 4-4.5	0.125000
"west sparkling bog" lake	0.125000
ph 5-5.5	0.125000
"forestry bog" lake	0.125000

Number of experiments associating the term to the sequence

Term	Score
hypolimnion	1.000000
LOWER IN epilimnion	1.000000
"mary lake"	1.000000
ph 5.5-6	1.000000
meromictic lake	1.000000
freshwater lake	1.000000
bog lake	1.000000
united states of america	1.000000
state of wisconsin	1.000000
LOWER IN hypolimnion	1.000000
epilimnion	1.000000
"hells kitchen" lake	1.000000
"trout bog" lake	1.000000
ph 4.5-5	1.000000
dimictic lake	1.000000
"south sparkling bog" lake	1.000000
"north sparkling bog" lake	1.000000
"crystal bog" lake	1.000000
polymictic lake	1.000000
ph 4-4.5	1.000000
"west sparkling bog" lake	1.000000
ph 5-5.5	1.000000
"forestry bog" lake	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
718	amnon	dominant epilimnion, "mary lake", ph 5.5-6, meromictic lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 12	approved	No
718	amnon	dominant hypolimnion, meromictic lake, "hells kitchen" lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 13	approved	No
718	amnon	dominant epilimnion, "trout bog" lake, ph 4.5-5, dimictic lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 14	approved	No
718	amnon	dominant hypolimnion, "mary lake", ph 5.5-6, meromictic lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 14	approved	No
718	amnon	dominant epilimnion, "south sparkling bog" lake, ph 4.5-5, dimictic lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 16	approved	No
718	amnon	dominant hypolimnion, "trout bog" lake, ph 4.5-5, dimictic lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 17	approved	No
718	amnon	dominant hypolimnion, "south sparkling bog" lake, ph 4.5-5, dimictic lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 18	approved	No
718	amnon	dominant hypolimnion, freshwater lake, bog lake, united states of america, state of wisconsin, ph 4.5-5, dimictic lake, "north sparkling bog" lake	2028-05-23	v4	1 / 18	approved	No
718	amnon	dominant epilimnion, freshwater lake, bog lake, united states of america, state of wisconsin, ph 4.5-5, dimictic lake, "north sparkling bog" lake	2028-05-23	v4	1 / 21	approved	No
718	amnon	dominant "crystal bog" lake, polymictic lake, ph 4-4.5, state of wisconsin, united states of america, epilimnion, bog lake, freshwater lake	2028-05-23	v4	1 / 22	approved	No
718	amnon	dominant hypolimnion, ph 4.5-5, "forestry bog" lake, polymictic lake, state of wisconsin, united states of america, bog lake, freshwater lake	2028-05-23	v4	1 / 22	approved	No
718	amnon	dominant epilimnion, meromictic lake, "hells kitchen" lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 23	approved	No
718	amnon	dominant epilimnion, ph 4.5-5, "forestry bog" lake, polymictic lake, state of wisconsin, united states of america, bog lake, freshwater lake	2028-05-23	v4	1 / 24	approved	No
718	amnon	dominant hypolimnion, "west sparkling bog" lake, polymictic lake, ph 5-5.5, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 25	approved	No
718	amnon	dominant "west sparkling bog" lake, polymictic lake, ph 5-5.5, epilimnion, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 25	approved	No
718	amnon	dominant hypolimnion, "crystal bog" lake, polymictic lake, ph 4-4.5, state of wisconsin, united states of america, bog lake, freshwater lake	2028-05-23	v4	1 / 25	approved	No
718	amnon	high in epilimnion compared to hypolimnion in ph 4.5-5 "forestry bog" lake polymictic lake state of wisconsin united states of america bog lake freshwater lake	2028-05-23	v4	1 / 47	approved	No
718	amnon	common hypolimnion, ph 4.5-5, "forestry bog" lake, polymictic lake, state of wisconsin, united states of america, bog lake, freshwater lake	2028-05-23	v4	1 / 85	approved	No
718	amnon	common epilimnion, ph 4.5-5, "forestry bog" lake, polymictic lake, state of wisconsin, united states of america, bog lake, freshwater lake	2028-05-23	v4	1 / 95	approved	No
718	amnon	high in epilimnion compared to hypolimnion in "crystal bog" lake polymictic lake ph 4-4.5 state of wisconsin united states of america bog lake freshwater lake	2028-05-23	v4	1 / 104	approved	No
718	amnon	common epilimnion, freshwater lake, bog lake, united states of america, state of wisconsin, ph 4.5-5, dimictic lake, "north sparkling bog" lake	2028-05-23	v4	1 / 112	approved	No
718	amnon	common hypolimnion, "west sparkling bog" lake, polymictic lake, ph 5-5.5, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 112	approved	No
718	amnon	common hypolimnion, freshwater lake, bog lake, united states of america, state of wisconsin, ph 4.5-5, dimictic lake, "north sparkling bog" lake	2028-05-23	v4	1 / 120	approved	No
718	amnon	high in hypolimnion compared to epilimnion in ph 4.5-5 "forestry bog" lake polymictic lake state of wisconsin united states of america bog lake freshwater lake	2028-05-23	v4	1 / 121	approved	No
718	amnon	common epilimnion, "trout bog" lake, ph 4.5-5, dimictic lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 121	approved	No
718	amnon	common hypolimnion, "crystal bog" lake, polymictic lake, ph 4-4.5, state of wisconsin, united states of america, bog lake, freshwater lake	2028-05-23	v4	1 / 131	approved	No
718	amnon	common "west sparkling bog" lake, polymictic lake, ph 5-5.5, epilimnion, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 140	approved	No
718	amnon	common "crystal bog" lake, polymictic lake, ph 4-4.5, state of wisconsin, united states of america, epilimnion, bog lake, freshwater lake	2028-05-23	v4	1 / 141	approved	No
718	amnon	common epilimnion, "south sparkling bog" lake, ph 4.5-5, dimictic lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 167	approved	No
718	amnon	common epilimnion, meromictic lake, "hells kitchen" lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 179	approved	No
718	amnon	common hypolimnion, "trout bog" lake, ph 4.5-5, dimictic lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 196	approved	No
718	amnon	common epilimnion, "mary lake", ph 5.5-6, meromictic lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 204	approved	No
718	amnon	high in epilimnion compared to hypolimnion in "west sparkling bog" lake polymictic lake ph 5-5.5 freshwater lake bog lake united states of america state of wisconsin	2028-05-23	v4	1 / 205	approved	No
718	amnon	common hypolimnion, "south sparkling bog" lake, ph 4.5-5, dimictic lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 211	approved	No
718	amnon	high in hypolimnion compared to epilimnion in "west sparkling bog" lake polymictic lake ph 5-5.5 freshwater lake bog lake united states of america state of wisconsin	2028-05-23	v4	1 / 281	approved	No
718	amnon	high in hypolimnion compared to epilimnion in "crystal bog" lake polymictic lake ph 4-4.5 state of wisconsin united states of america bog lake freshwater lake	2028-05-23	v4	1 / 289	approved	No
718	amnon	high in hypolimnion compared to epilimnion in freshwater lake bog lake united states of america state of wisconsin ph 4.5-5 dimictic lake "north sparkling bog" lake	2028-05-23	v4	1 / 351	approved	No
718	amnon	high in epilimnion compared to hypolimnion in "south sparkling bog" lake ph 4.5-5 dimictic lake freshwater lake bog lake united states of america state of wisconsin	2028-05-23	v4	1 / 382	approved	No
718	amnon	common hypolimnion, meromictic lake, "hells kitchen" lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 400	approved	No
718	amnon	high in epilimnion compared to hypolimnion in freshwater lake bog lake united states of america state of wisconsin ph 4.5-5 dimictic lake "north sparkling bog" lake	2028-05-23	v4	1 / 488	approved	No
718	amnon	high in epilimnion compared to hypolimnion in "trout bog" lake ph 4.5-5 dimictic lake freshwater lake bog lake united states of america state of wisconsin	2028-05-23	v4	1 / 509	approved	No
718	amnon	common hypolimnion, "mary lake", ph 5.5-6, meromictic lake, freshwater lake, bog lake, united states of america, state of wisconsin	2028-05-23	v4	1 / 559	approved	No
718	amnon	high in epilimnion compared to hypolimnion in meromictic lake "hells kitchen" lake freshwater lake bog lake united states of america state of wisconsin	2028-05-23	v4	1 / 594	approved	No
718	amnon	high in hypolimnion compared to epilimnion in "south sparkling bog" lake ph 4.5-5 dimictic lake freshwater lake bog lake united states of america state of wisconsin	2028-05-23	v4	1 / 812	approved	No
718	amnon	high in hypolimnion compared to epilimnion in "trout bog" lake ph 4.5-5 dimictic lake freshwater lake bog lake united states of america state of wisconsin	2028-05-23	v4	1 / 843	approved	No
718	amnon	high in hypolimnion compared to epilimnion in meromictic lake "hells kitchen" lake freshwater lake bog lake united states of america state of wisconsin	2028-05-23	v4	1 / 1165	approved	No
718	amnon	high in epilimnion compared to hypolimnion in "mary lake" ph 5.5-6 meromictic lake freshwater lake bog lake united states of america state of wisconsin	2028-05-23	v4	1 / 1195	approved	No
718	amnon	high in hypolimnion compared to epilimnion in "mary lake" ph 5.5-6 meromictic lake freshwater lake bog lake united states of america state of wisconsin	2028-05-23	v4	1 / 2370	approved	No

Experiment ID: 718

Annotations for experiment: