Experiment ID: 738

Field Description
nameimpact of industrial production system parameters on chicken microbiomes: mechanisms to improve performance and reduce campylobacter
doihttps://doi.org/10.1186/s40168-020-00908-8
sraprjeb34742
mapmd5bd618c1d90324b9c355909893537ff5b
datamd52006feb4db8bd8f1dedbe4b05794ec73

Annotations for experiment:

term enrichment score
TermScore
age 30 days0.400000
age 1 week0.333333
LOWER IN high wellfare feed0.285714
high wellfare feed0.285714
standard feed0.250000
LOWER IN standard feed0.250000
caecum0.222222
chicken0.181818
gallus gallus0.181818
united kingdom0.166667
LOWER IN age 30 days0.166667
LOWER IN age 1 week0.153846
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN age 30 days0.500000
LOWER IN high wellfare feed0.500000
high wellfare feed0.500000
LOWER IN age 1 week0.333333
age 30 days0.333333
standard feed0.333333
LOWER IN standard feed0.333333
age 1 week0.250000
caecum0.125000
chicken0.100000
gallus gallus0.100000
united kingdom0.090909
Fraction of annotations for the query sequences containing the term
TermScore
caecum1.000000
united kingdom1.000000
chicken1.000000
gallus gallus1.000000
age 30 days0.500000
age 1 week0.500000
LOWER IN high wellfare feed0.200000
standard feed0.200000
LOWER IN standard feed0.200000
high wellfare feed0.200000
LOWER IN age 1 week0.100000
LOWER IN age 30 days0.100000

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