dbBact

×

Experiment ID: 740

Field	Description
name	no impact of a short-term climatic “el niño” fluctuation on gut microbial diversity in populations of the galápagos marine iguana (amblyrhynchus cristatus)
doi	https://doi.org/10.1007/s00114-020-01714-w
sra	prjna658812
mapmd5	44744cd459aaf114804ef4016badc09c
datamd5	4853965c7c035f741dfdeba4f0716910

Annotations for experiment:

term enrichment score

Term	Score
marine iguana	0.666667
amblyrhynchus cristatus	0.666667
cloacal swab	0.666667
galapagos islands	0.500000
alimentary part of gastrointestinal system	0.500000
ecuador	0.285714
LOWER IN high body condition index	0.250000
low body condition index	0.250000
LOWER IN low body condition index	0.250000
high body condition index	0.250000
cloaca	0.222222
LOWER IN male	0.222222
LOWER IN male organism	0.200000
LOWER IN female organism	0.200000
female organism	0.166667
male organism	0.153846
male	0.133333
LOWER IN female	0.071429
female	0.031746

Fraction of dbbact annotations with this term covered by the query

Term	Score
marine iguana	0.500000
amblyrhynchus cristatus	0.500000
cloacal swab	0.500000
LOWER IN high body condition index	0.500000
low body condition index	0.500000
LOWER IN low body condition index	0.500000
high body condition index	0.500000
galapagos islands	0.333333
alimentary part of gastrointestinal system	0.333333
LOWER IN male	0.333333
LOWER IN male organism	0.250000
LOWER IN female organism	0.250000
ecuador	0.166667
female organism	0.166667
male organism	0.142857
cloaca	0.125000
male	0.111111
LOWER IN female	0.045455
female	0.017544

Fraction of annotations for the query sequences containing the term

Term	Score
marine iguana	1.000000
amblyrhynchus cristatus	1.000000
ecuador	1.000000
galapagos islands	1.000000
cloacal swab	1.000000
alimentary part of gastrointestinal system	1.000000
cloaca	1.000000
LOWER IN male organism	0.166667
LOWER IN male	0.166667
female	0.166667
female organism	0.166667
LOWER IN high body condition index	0.166667
low body condition index	0.166667
LOWER IN low body condition index	0.166667
high body condition index	0.166667
LOWER IN female	0.166667
LOWER IN female organism	0.166667
male	0.166667
male organism	0.166667

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
740	amnon	high in male male organism compared to female female organism in marine iguana amblyrhynchus cristatus ecuador galapagos islands cloacal swab alimentary part of gastrointestinal system cloaca	2021-02-08	v4	No	1 / 10
740	amnon	dominant marine iguana, amblyrhynchus cristatus, ecuador, galapagos islands, cloacal swab, alimentary part of gastrointestinal system, cloaca	2021-02-08	v4	No	1 / 20
740	amnon	high in high body condition index compared to low body condition index in marine iguana amblyrhynchus cristatus ecuador galapagos islands cloacal swab alimentary part of gastrointestinal system cloaca	2021-02-08	v4	No	1 / 21
740	amnon	high in low body condition index compared to high body condition index in marine iguana amblyrhynchus cristatus ecuador galapagos islands cloacal swab alimentary part of gastrointestinal system cloaca	2021-02-08	v4	No	1 / 25
740	amnon	high in female female organism compared to male organism male in marine iguana amblyrhynchus cristatus ecuador galapagos islands cloacal swab alimentary part of gastrointestinal system cloaca	2021-02-08	v4	No	1 / 31
740	amnon	common marine iguana, amblyrhynchus cristatus, ecuador, galapagos islands, cloacal swab, alimentary part of gastrointestinal system, cloaca	2021-02-08	v4	No	1 / 110

Problems / suggestions? Please email info AT dbbact DOT org