Experiment ID: 748

Field Description
nameinfluence of industry standard feeding frequencies on behavioral patterns and rumen and fecal bacterial communities in holstein and jersey cows
doihttps://doi.org/10.1371/journal.pone.0248147
srasrp271418
mapmd59bf26f537941bf0091bfbd52986eed9a
datamd5ae81c4ca7fa2ef62610ba3fecaeb035b

Annotations for experiment:

term enrichment score
TermScore
state of mississippi0.666667
jersey cow0.461538
holstein dairy cow0.375000
ruminal fluid0.250000
LOWER IN jersey cow0.222222
LOWER IN holstein dairy cow0.222222
cow0.166667
female organism0.153846
LOWER IN ruminal fluid0.125000
LOWER IN rumen0.111111
bos taurus0.111111
rumen0.090909
LOWER IN feces0.057143
research facility0.013889
united states of america0.008264
feces0.006557
Fraction of dbbact annotations with this term covered by the query
TermScore
state of mississippi0.500000
LOWER IN ruminal fluid0.500000
LOWER IN jersey cow0.500000
jersey cow0.500000
LOWER IN holstein dairy cow0.500000
holstein dairy cow0.333333
LOWER IN rumen0.250000
ruminal fluid0.166667
cow0.090909
female organism0.083333
bos taurus0.058824
rumen0.050000
LOWER IN feces0.047619
research facility0.006993
united states of america0.004149
feces0.003300
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
state of mississippi1.000000
research facility1.000000
female organism1.000000
bos taurus1.000000
cow1.000000
ruminal fluid0.500000
rumen0.500000
feces0.500000
holstein dairy cow0.428571
jersey cow0.428571
LOWER IN jersey cow0.142857
LOWER IN holstein dairy cow0.142857
LOWER IN feces0.071429
LOWER IN ruminal fluid0.071429
LOWER IN rumen0.071429
Exp. ID User ID Description Date Region Flag Sequences
748amnondominant jersey cow, united states of america, state of mississippi, research facility, female organism, feces, bos taurus, cow2021-03-10v4No1 / 13
748amnondominant holstein dairy cow, united states of america, state of mississippi, research facility, female organism, feces, bos taurus, cow2021-03-10v4No1 / 13
748amnondominant jersey cow, ruminal fluid, rumen, united states of america, state of mississippi, research facility, female organism, bos taurus, cow2021-03-10v4No1 / 14
748amnondominant holstein dairy cow, ruminal fluid, rumen, united states of america, state of mississippi, research facility, female organism, bos taurus, cow2021-03-10v4No1 / 16
748amnon high in jersey cow compared to holstein dairy cow in united states of america state of mississippi research facility female organism feces bos taurus cow 2021-03-10v4No1 / 308
748amnon high in holstein dairy cow compared to jersey cow in united states of america state of mississippi research facility female organism feces bos taurus cow 2021-03-10v4No1 / 407
748amnoncommon jersey cow, united states of america, state of mississippi, research facility, female organism, feces, bos taurus, cow2021-03-10v4No1 / 516
748amnoncommon holstein dairy cow, united states of america, state of mississippi, research facility, female organism, feces, bos taurus, cow2021-03-10v4No1 / 577
748amnon high in jersey cow compared to holstein dairy cow in ruminal fluid rumen united states of america state of mississippi research facility female organism bos taurus cow 2021-03-10v4No1 / 603
748amnoncommon holstein dairy cow, ruminal fluid, rumen, united states of america, state of mississippi, research facility, female organism, bos taurus, cow2021-03-10v4No1 / 614
748amnoncommon jersey cow, ruminal fluid, rumen, united states of america, state of mississippi, research facility, female organism, bos taurus, cow2021-03-10v4No1 / 632
748amnon high in holstein dairy cow compared to jersey cow in ruminal fluid rumen united states of america state of mississippi research facility female organism bos taurus cow 2021-03-10v4No1 / 638
748amnon high in feces compared to ruminal fluid rumen in united states of america state of mississippi research facility female organism bos taurus cow 2021-03-10v4No1 / 2467
748amnon high in ruminal fluid rumen compared to feces in united states of america state of mississippi research facility female organism bos taurus cow 2021-03-10v4No1 / 2716

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