Experiment ID: 748

Field Description
nameinfluence of industry standard feeding frequencies on behavioral patterns and rumen and fecal bacterial communities in holstein and jersey cows
doihttps://doi.org/10.1371/journal.pone.0248147
srasrp271418
mapmd59bf26f537941bf0091bfbd52986eed9a
datamd5ae81c4ca7fa2ef62610ba3fecaeb035b

Annotations for experiment:

term enrichment score
TermScore
state of mississippi0.666667
jersey cow0.461538
holstein dairy cow0.375000
ruminal fluid0.250000
LOWER IN jersey cow0.222222
LOWER IN holstein dairy cow0.200000
cow0.166667
female organism0.142857
bos taurus0.111111
LOWER IN ruminal fluid0.100000
rumen0.090909
LOWER IN rumen0.058824
research facility0.013514
united states of america0.008065
feces0.006329
LOWER IN feces0.006098
Fraction of dbbact annotations with this term covered by the query
TermScore
state of mississippi0.500000
LOWER IN jersey cow0.500000
jersey cow0.500000
holstein dairy cow0.333333
LOWER IN holstein dairy cow0.333333
ruminal fluid0.166667
LOWER IN ruminal fluid0.166667
cow0.090909
female organism0.076923
bos taurus0.058824
rumen0.050000
LOWER IN rumen0.050000
research facility0.006803
united states of america0.004049
LOWER IN feces0.003185
feces0.003185
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
research facility1.000000
bos taurus1.000000
cow1.000000
female organism1.000000
state of mississippi1.000000
rumen0.500000
ruminal fluid0.500000
feces0.500000
holstein dairy cow0.428571
jersey cow0.428571
LOWER IN jersey cow0.142857
LOWER IN holstein dairy cow0.142857
LOWER IN feces0.071429
LOWER IN rumen0.071429
LOWER IN ruminal fluid0.071429
Exp. ID User ID Description Date Region Flag Sequences
748amnondominant feces, united states of america, research facility, bos taurus, cow, female organism, state of mississippi, jersey cow2021-03-10v4No1 / 13
748amnondominant feces, united states of america, research facility, bos taurus, cow, female organism, state of mississippi, holstein dairy cow2021-03-10v4No1 / 13
748amnondominant united states of america, research facility, rumen, bos taurus, cow, female organism, ruminal fluid, state of mississippi, jersey cow2021-03-10v4No1 / 14
748amnondominant united states of america, research facility, rumen, bos taurus, cow, female organism, ruminal fluid, state of mississippi, holstein dairy cow2021-03-10v4No1 / 16
748amnon high in jersey cow compared to holstein dairy cow in feces united states of america research facility bos taurus cow female organism state of mississippi 2021-03-10v4No1 / 308
748amnon high in holstein dairy cow compared to jersey cow in feces united states of america research facility bos taurus cow female organism state of mississippi 2021-03-10v4No1 / 407
748amnoncommon feces, united states of america, research facility, bos taurus, cow, female organism, state of mississippi, jersey cow2021-03-10v4No1 / 516
748amnoncommon feces, united states of america, research facility, bos taurus, cow, female organism, state of mississippi, holstein dairy cow2021-03-10v4No1 / 577
748amnon high in jersey cow compared to holstein dairy cow in united states of america research facility rumen bos taurus cow female organism ruminal fluid state of mississippi 2021-03-10v4No1 / 603
748amnoncommon united states of america, research facility, rumen, bos taurus, cow, female organism, ruminal fluid, state of mississippi, holstein dairy cow2021-03-10v4No1 / 614
748amnoncommon united states of america, research facility, rumen, bos taurus, cow, female organism, ruminal fluid, state of mississippi, jersey cow2021-03-10v4No1 / 632
748amnon high in holstein dairy cow compared to jersey cow in united states of america research facility rumen bos taurus cow female organism ruminal fluid state of mississippi 2021-03-10v4No1 / 638
748amnon high in feces compared to rumen ruminal fluid in united states of america research facility bos taurus cow female organism state of mississippi 2021-03-10v4No1 / 2467
748amnon high in rumen ruminal fluid compared to feces in united states of america research facility bos taurus cow female organism state of mississippi 2021-03-10v4No1 / 2716

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