dbBact

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Experiment ID: 757

Field	Description
name	gut microbiome profiles and associated metabolic pathways in hiv-infected treatment-naïve patients
doi	https://doi.org/10.3390/cells10020385
sra	prjna682416
mapmd5	ae9fd5d0723cafed229293de80aceef6
datamd5	958c547e8e3301234179d5000e8d5c1d

Annotations for experiment:

term enrichment score

Term	Score
santa catarina state	0.666667
LOWER IN male	0.080000
brazil	0.080000
LOWER IN female	0.071429
male	0.041667
female	0.027027
adult	0.009662
homo sapiens	0.006173
feces	0.005208

Fraction of dbbact annotations with this term covered by the query

Term	Score
santa catarina state	0.500000
LOWER IN male	0.047619
brazil	0.041667
LOWER IN female	0.041667
male	0.022727
female	0.014286
adult	0.004854
homo sapiens	0.003096
feces	0.002611

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
adult	1.000000
santa catarina state	1.000000
brazil	1.000000
homo sapiens	1.000000
LOWER IN female	0.250000
male	0.250000
LOWER IN male	0.250000
female	0.250000

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
adult	1.000000
santa catarina state	1.000000
brazil	1.000000
homo sapiens	1.000000
LOWER IN female	1.000000
male	1.000000
LOWER IN male	1.000000
female	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
757	amnon	high in female compared to male in feces adult santa catarina state brazil homo sapiens	2021-03-28	v3	1 / 11	approved	No
757	amnon	dominant feces, adult, santa catarina state, brazil, homo sapiens	2021-03-28	v3	1 / 19	approved	No
757	amnon	high in male compared to female in feces adult santa catarina state brazil homo sapiens	2021-03-28	v3	1 / 44	approved	No
757	amnon	common feces, adult, santa catarina state, brazil, homo sapiens	2021-03-28	v3	1 / 67	approved	No

Problems / suggestions? Please email info AT dbbact DOT org