Experiment ID: 759

Field Description
nameeffects of domestication on the gut microbiota parallel those of human industrialization
doihttps://doi.org/10.7554/elife.60197
sraprjeb36262
mapmd542ba6fd50ca6ae2e3c97cc405fee58ef
datamd582efd96f86c35e1c193250b19cee33d0

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
state of vermont0.500000
LOWER IN state of vermont0.500000
LOWER IN state of alabama0.500000
LOWER IN wild boar0.500000
LOWER IN state of new york0.500000
LOWER IN new york city0.500000
LOWER IN wildlife sactuary0.500000
LOWER IN city of boston0.500000
LOWER IN commonwealth of massachusetts0.500000
wildlife sactuary0.500000
LOWER IN dog food diet0.500000
raw meat diet0.500000
domestic0.500000
LOWER IN raw meat diet0.500000
dog food diet0.500000
wild boar0.333333
LOWER IN pig0.333333
city of boston0.333333
LOWER IN canis lupus0.333333
LOWER IN wolf0.333333
state of alabama0.250000
LOWER IN farm0.250000
LOWER IN dog0.250000
LOWER IN canis lupus familiaris0.250000
canis lupus0.250000
wolf0.200000
commonwealth of massachusetts0.142857
state of minnesota0.142857
LOWER IN research facility0.142857
new york city0.142857
rattus norvegicus0.100000
state of new york0.100000
LOWER IN wild0.076923
sus scrofa0.062500
pig0.062500
rat0.062500
dog0.045455
wild0.041667
canis lupus familiaris0.038462
farm0.028571
research facility0.006993
united states of america0.004149
feces0.003300
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
feces1.000000
state of minnesota0.400000
wild0.300000
sus scrofa0.300000
rattus norvegicus0.300000
rat0.300000
canis lupus familiaris0.250000
dog0.250000
state of alabama0.150000
wild boar0.150000
state of vermont0.150000
farm0.150000
pig0.150000
commonwealth of massachusetts0.150000
city of boston0.150000
research facility0.150000
new york city0.150000
state of new york0.150000
wildlife sactuary0.150000
canis lupus0.150000
wolf0.150000
LOWER IN wild0.100000
domestic0.100000
LOWER IN state of vermont0.050000
LOWER IN farm0.050000
LOWER IN pig0.050000
LOWER IN state of alabama0.050000
LOWER IN wild boar0.050000
LOWER IN state of new york0.050000
LOWER IN new york city0.050000
LOWER IN canis lupus0.050000
LOWER IN wolf0.050000
LOWER IN wildlife sactuary0.050000
LOWER IN research facility0.050000
LOWER IN city of boston0.050000
LOWER IN commonwealth of massachusetts0.050000
LOWER IN dog0.050000
LOWER IN canis lupus familiaris0.050000
LOWER IN dog food diet0.050000
raw meat diet0.050000
LOWER IN raw meat diet0.050000
dog food diet0.050000
Exp. ID User ID Description Date Region Flag Sequences
759amnondominant state of alabama, united states of america, feces, wild, wild boar, sus scrofa2021-04-04v4No1 / 14
759amnondominant state of new york, new york city, wild, feces, united states of america, rattus norvegicus, rat2021-04-06v4No1 / 17
759amnondominant wildlife sactuary, state of minnesota, canis lupus, wolf, united states of america, feces2021-04-04v4No1 / 20
759amnondominant city of boston, commonwealth of massachusetts, research facility, feces, united states of america, rattus norvegicus, rat2021-04-06v4No1 / 21
759amnondominant state of vermont, farm, pig, united states of america, feces, sus scrofa2021-04-04v4No1 / 21
759amnondominant state of minnesota, domestic, dog, canis lupus familiaris, united states of america, feces2021-04-04v4No1 / 22
759amnon high in dog food diet compared to raw meat diet in dog canis lupus familiaris state of minnesota united states of america feces 2021-04-06v4No1 / 35
759amnoncommon state of minnesota, domestic, dog, canis lupus familiaris, united states of america, feces2021-04-04v4No1 / 57
759amnoncommon wildlife sactuary, state of minnesota, canis lupus, wolf, united states of america, feces2021-04-04v4No1 / 58
759amnon high in raw meat diet compared to dog food diet in dog canis lupus familiaris state of minnesota united states of america feces 2021-04-06v4No1 / 74
759amnon high in wildlife sactuary canis lupus wolf compared to dog canis lupus familiaris in state of minnesota united states of america feces 2021-04-06v4No1 / 78
759amnoncommon state of new york, new york city, wild, feces, united states of america, rattus norvegicus, rat2021-04-06v4No1 / 94
759amnon high in wild new york city state of new york compared to research facility city of boston commonwealth of massachusetts in feces united states of america rattus norvegicus rat 2021-04-06v4No1 / 96
759amnon high in canis lupus familiaris dog compared to canis lupus wolf wildlife sactuary in state of minnesota united states of america feces 2021-04-06v4No1 / 148
759amnoncommon city of boston, commonwealth of massachusetts, research facility, feces, united states of america, rattus norvegicus, rat2021-04-06v4No1 / 179
759amnon high in commonwealth of massachusetts city of boston research facility compared to wild state of new york new york city in feces united states of america rattus norvegicus rat 2021-04-06v4No1 / 217
759amnon high in state of vermont farm pig compared to state of alabama wild wild boar in united states of america feces sus scrofa 2021-04-04v4No1 / 258
759amnon high in state of alabama wild wild boar compared to state of vermont farm pig in united states of america feces sus scrofa 2021-04-04v4No1 / 268
759amnoncommon state of vermont, farm, pig, united states of america, feces, sus scrofa2021-04-04v4No1 / 328
759amnoncommon state of alabama, united states of america, feces, wild, wild boar, sus scrofa2021-04-04v4No1 / 362

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