Experiment ID: 759

Field Description
nameeffects of domestication on the gut microbiota parallel those of human industrialization
doihttps://doi.org/10.7554/elife.60197
sraprjeb36262
mapmd542ba6fd50ca6ae2e3c97cc405fee58ef
datamd582efd96f86c35e1c193250b19cee33d0

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
state of vermont0.500000
LOWER IN state of vermont0.500000
city of boston0.500000
LOWER IN wildlife sactuary0.500000
LOWER IN city of boston0.500000
wildlife sactuary0.500000
raw meat diet0.500000
LOWER IN dog food diet0.500000
domestic0.500000
dog food diet0.500000
LOWER IN raw meat diet0.500000
wild boar0.333333
LOWER IN wild boar0.333333
state of alabama0.250000
LOWER IN state of alabama0.250000
LOWER IN wolf0.250000
wolf0.250000
LOWER IN new york city0.142857
new york city0.142857
state of minnesota0.125000
commonwealth of massachusetts0.111111
LOWER IN commonwealth of massachusetts0.111111
LOWER IN state of new york0.083333
state of new york0.083333
rattus norvegicus0.071429
sus scrofa0.062500
pig0.062500
LOWER IN pig0.062500
rat0.055556
dog0.043478
LOWER IN dog0.043478
wild0.041667
LOWER IN wild0.041667
canis lupus familiaris0.038462
LOWER IN canis lupus0.038462
canis lupus0.038462
LOWER IN canis lupus familiaris0.038462
farm0.027778
LOWER IN farm0.027778
research facility0.006803
LOWER IN research facility0.006803
united states of america0.004049
feces0.003185
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
united states of america1.000000
state of minnesota0.400000
sus scrofa0.300000
wild0.300000
rattus norvegicus0.300000
rat0.300000
canis lupus familiaris0.250000
dog0.250000
state of alabama0.150000
wild boar0.150000
farm0.150000
pig0.150000
state of vermont0.150000
research facility0.150000
commonwealth of massachusetts0.150000
city of boston0.150000
state of new york0.150000
new york city0.150000
canis lupus0.150000
wolf0.150000
wildlife sactuary0.150000
LOWER IN wild0.100000
domestic0.100000
LOWER IN farm0.050000
LOWER IN pig0.050000
LOWER IN state of vermont0.050000
LOWER IN state of alabama0.050000
LOWER IN wild boar0.050000
LOWER IN state of new york0.050000
LOWER IN new york city0.050000
LOWER IN canis lupus0.050000
LOWER IN wolf0.050000
LOWER IN wildlife sactuary0.050000
LOWER IN research facility0.050000
LOWER IN commonwealth of massachusetts0.050000
LOWER IN city of boston0.050000
LOWER IN canis lupus familiaris0.050000
LOWER IN dog0.050000
raw meat diet0.050000
LOWER IN dog food diet0.050000
dog food diet0.050000
LOWER IN raw meat diet0.050000
Exp. ID User ID Description Date Region Flag Sequences
759amnondominant feces, united states of america, sus scrofa, state of alabama, wild, wild boar2021-04-04v4No1 / 14
759amnondominant feces, united states of america, rattus norvegicus, state of new york, new york city, rat, wild2021-04-06v4No1 / 17
759amnondominant feces, united states of america, state of minnesota, canis lupus, wolf, wildlife sactuary2021-04-04v4No1 / 20
759amnondominant feces, united states of america, research facility, rattus norvegicus, commonwealth of massachusetts, rat, city of boston2021-04-06v4No1 / 21
759amnondominant feces, united states of america, farm, sus scrofa, pig, state of vermont2021-04-04v4No1 / 21
759amnondominant feces, united states of america, canis lupus familiaris, state of minnesota, dog, domestic2021-04-04v4No1 / 22
759amnon high in dog food diet compared to raw meat diet in feces united states of america canis lupus familiaris state of minnesota dog 2021-04-06v4No1 / 35
759amnoncommon feces, united states of america, canis lupus familiaris, state of minnesota, dog, domestic2021-04-04v4No1 / 57
759amnoncommon feces, united states of america, state of minnesota, canis lupus, wolf, wildlife sactuary2021-04-04v4No1 / 58
759amnon high in raw meat diet compared to dog food diet in feces united states of america canis lupus familiaris state of minnesota dog 2021-04-06v4No1 / 74
759amnon high in canis lupus wolf wildlife sactuary compared to canis lupus familiaris dog in feces united states of america state of minnesota 2021-04-06v4No1 / 78
759amnoncommon feces, united states of america, rattus norvegicus, state of new york, new york city, rat, wild2021-04-06v4No1 / 94
759amnon high in state of new york new york city wild compared to research facility commonwealth of massachusetts city of boston in feces united states of america rattus norvegicus rat 2021-04-06v4No1 / 96
759amnon high in canis lupus familiaris dog compared to canis lupus wolf wildlife sactuary in feces united states of america state of minnesota 2021-04-06v4No1 / 148
759amnoncommon feces, united states of america, research facility, rattus norvegicus, commonwealth of massachusetts, rat, city of boston2021-04-06v4No1 / 179
759amnon high in research facility commonwealth of massachusetts city of boston compared to state of new york new york city wild in feces united states of america rattus norvegicus rat 2021-04-06v4No1 / 217
759amnon high in farm pig state of vermont compared to state of alabama wild wild boar in feces united states of america sus scrofa 2021-04-04v4No1 / 258
759amnon high in state of alabama wild wild boar compared to farm pig state of vermont in feces united states of america sus scrofa 2021-04-04v4No1 / 268
759amnoncommon feces, united states of america, farm, sus scrofa, pig, state of vermont2021-04-04v4No1 / 328
759amnoncommon feces, united states of america, sus scrofa, state of alabama, wild, wild boar2021-04-04v4No1 / 362

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