dbBact

Field	Description
name	deep tillage combined with biofertilizer following soil fumigation improved chrysanthemum growth by regulating the soil microbiome
doi	https://doi.org/10.1002/mbo3.1045
sra	prjna558207
mapmd5	8ff3f3ed4e1d33ea3f053c8dd3255465
datamd5	b45c40424a525a936a4f669ed1c168d2

term enrichment score

Term	Score
chrysanthemum morifolium ramat.	0.666667
chrysanthemum	0.666667
nanjing county	0.666667
dazomet	0.562500
soil fumigation	0.562500
paenibacillus polymyxa	0.562500
paenibacillus	0.562500
pig manure	0.562500
compost biofilter	0.533333
ph 6.9	0.500000
compost soil	0.500000
bio-organic fertilizer	0.439024
deep plough	0.363636
fusarium	0.300000
conventional tillage	0.266667
fusarium oxysporum f. sp. chrysanthemi	0.222222
compost	0.222222
LOWER IN deep plough	0.222222
LOWER IN conventional tillage	0.181818
LOWER IN paenibacillus	0.125000
LOWER IN paenibacillus polymyxa	0.125000
LOWER IN compost soil	0.125000
LOWER IN soil fumigation	0.125000
LOWER IN dazomet	0.125000
low fusarium cumulative disease incidence	0.117647
LOWER IN high fusarium cumulative disease incidence	0.117647
LOWER IN conservation tillage	0.117647
conservation tillage	0.117647
LOWER IN bio-organic fertilizer	0.117647
LOWER IN low fusarium cumulative disease incidence	0.117647
high fusarium cumulative disease incidence	0.117647
soil	0.019608
china	0.010753
LOWER IN control	0.009804

Fraction of dbbact annotations with this term covered by the query

Term	Score
dazomet	0.500000
soil fumigation	0.500000
chrysanthemum morifolium ramat.	0.500000
chrysanthemum	0.500000
nanjing county	0.500000
compost biofilter	0.500000
paenibacillus polymyxa	0.500000
paenibacillus	0.500000
compost soil	0.500000
pig manure	0.500000
deep plough	0.500000
fusarium	0.500000
fusarium oxysporum f. sp. chrysanthemi	0.500000
compost	0.500000
LOWER IN deep plough	0.500000
LOWER IN paenibacillus	0.500000
LOWER IN paenibacillus polymyxa	0.500000
LOWER IN compost soil	0.500000
LOWER IN soil fumigation	0.500000
LOWER IN dazomet	0.500000
ph 6.9	0.333333
bio-organic fertilizer	0.333333
low fusarium cumulative disease incidence	0.333333
LOWER IN high fusarium cumulative disease incidence	0.333333
LOWER IN conservation tillage	0.333333
conservation tillage	0.333333
LOWER IN bio-organic fertilizer	0.333333
LOWER IN low fusarium cumulative disease incidence	0.333333
high fusarium cumulative disease incidence	0.333333
conventional tillage	0.250000
LOWER IN conventional tillage	0.250000
soil	0.009901
china	0.005405
LOWER IN control	0.005263

Fraction of annotations for the query sequences containing the term

Term	Score
soil	1.000000
ph 6.9	1.000000
chrysanthemum morifolium ramat.	1.000000
chrysanthemum	1.000000
china	1.000000
nanjing county	1.000000
dazomet	0.642857
soil fumigation	0.642857
bio-organic fertilizer	0.642857
paenibacillus polymyxa	0.642857
paenibacillus	0.642857
pig manure	0.642857
compost biofilter	0.571429
compost soil	0.500000
conventional tillage	0.285714
deep plough	0.285714
fusarium	0.214286
fusarium oxysporum f. sp. chrysanthemi	0.142857
compost	0.142857
LOWER IN deep plough	0.142857
LOWER IN conventional tillage	0.142857
LOWER IN control	0.071429
low fusarium cumulative disease incidence	0.071429
LOWER IN high fusarium cumulative disease incidence	0.071429
LOWER IN conservation tillage	0.071429
conservation tillage	0.071429
LOWER IN paenibacillus	0.071429
LOWER IN paenibacillus polymyxa	0.071429
LOWER IN compost soil	0.071429
LOWER IN bio-organic fertilizer	0.071429
LOWER IN soil fumigation	0.071429
LOWER IN dazomet	0.071429
LOWER IN low fusarium cumulative disease incidence	0.071429
high fusarium cumulative disease incidence	0.071429

Number of experiments associating the term to the sequence

Term	Score
dazomet	1.000000
soil fumigation	1.000000
soil	1.000000
ph 6.9	1.000000
chrysanthemum morifolium ramat.	1.000000
chrysanthemum	1.000000
china	1.000000
nanjing county	1.000000
bio-organic fertilizer	1.000000
compost biofilter	1.000000
paenibacillus polymyxa	1.000000
paenibacillus	1.000000
compost soil	1.000000
pig manure	1.000000
conventional tillage	1.000000
deep plough	1.000000
fusarium	1.000000
fusarium oxysporum f. sp. chrysanthemi	1.000000
compost	1.000000
LOWER IN control	1.000000
low fusarium cumulative disease incidence	1.000000
LOWER IN high fusarium cumulative disease incidence	1.000000
LOWER IN conservation tillage	1.000000
LOWER IN deep plough	1.000000
LOWER IN conventional tillage	1.000000
conservation tillage	1.000000
LOWER IN paenibacillus	1.000000
LOWER IN paenibacillus polymyxa	1.000000
LOWER IN compost soil	1.000000
LOWER IN bio-organic fertilizer	1.000000
LOWER IN soil fumigation	1.000000
LOWER IN dazomet	1.000000
LOWER IN low fusarium cumulative disease incidence	1.000000
high fusarium cumulative disease incidence	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
767	sheryo	Dominant in soil planted with Chrysanthemum, fertilized with bio-organic fertilizer, amended with soil fumigant 'Dazomet' and deep plough in Nanjing China (dominant deep plough, conventional tillage, pig manure, compost soil, paenibacillus, paenibacillus polymyxa, compost biofilter, bio-organic fertilizer, nanjing county, china, chrysanthemum, chrysanthemum morifolium ramat., ph 6.9, soil, soil fumigation, dazomet)	2021-04-18	v4	1 / 7	approved	No
767	sheryo	Dominant in soil planted with Chrysanthemum, amended with soil fumigant 'Dazomet' in Nanjing China (dominant dazomet, soil fumigation, soil, ph 6.9, chrysanthemum morifolium ramat., chrysanthemum, china, nanjing county)	2021-04-14	v4	1 / 11	approved	No
767	sheryo	Dominant in soil planted with Chrysanthemum, fertilized with bio-organic fertilizer and amended with soil fumigant 'Dazomet' in Nanjing China (dominant pig manure, compost soil, paenibacillus, paenibacillus polymyxa, compost biofilter, bio-organic fertilizer, nanjing county, china, chrysanthemum, chrysanthemum morifolium ramat., ph 6.9, soil, soil fumigation, dazomet)	2021-04-14	v4	1 / 11	approved	No
767	sheryo	Dominant in soil planted with Chrysanthemum, infested with fusarium in Nanjing China (dominant soil, fusarium, fusarium oxysporum f. sp. chrysanthemi, ph 6.9, chrysanthemum morifolium ramat., chrysanthemum, china, nanjing county)	2021-04-14	v4	1 / 12	approved	No
767	sheryo	Dominant in soil planted with Chrysanthemum, fertilized with bio-organic fertilizer in Nanjing China (dominant paenibacillus polymyxa, paenibacillus, compost, compost biofilter, pig manure, bio-organic fertilizer, soil, ph 6.9, chrysanthemum morifolium ramat., chrysanthemum, china, nanjing county)	2021-04-14	v4	1 / 14	approved	No
767	sheryo	High in control treatment soil with high fusarium indices compared to soil with low fusarium indices planted with Chrysanthemum in Nanjing China ( high in fusarium high fusarium cumulative disease incidence compared to conventional tillage paenibacillus paenibacillus polymyxa compost soil bio-organic fertilizer soil fumigation dazomet deep plough low fusarium cumulative disease incidence in soil ph 6.9 chrysanthemum morifolium ramat. chrysanthemum china nanjing county )	2021-04-18	v4	1 / 252	approved	No
767	sheryo	High in conservation tillage compared to conventional tillage soil planted with Chrysanthemum, fertilized with bio-organic fertilizer, amended with soil fumigant 'Dazomet' in Nanjing China ( high in conservation tillage compared to deep plough conventional tillage in dazomet soil fumigation soil ph 6.9 chrysanthemum morifolium ramat. chrysanthemum china nanjing county bio-organic fertilizer compost biofilter paenibacillus polymyxa paenibacillus compost soil pig manure )	2021-04-18	v4	1 / 350	approved	No
767	sheryo	High in conventional tillage compared to conservation tillage soil planted with Chrysanthemum, fertilized with bio-organic fertilizer, amended with soil fumigant 'Dazomet' in Nanjing China ( high in deep plough conventional tillage compared to conservation tillage in dazomet soil fumigation soil ph 6.9 chrysanthemum morifolium ramat. chrysanthemum china nanjing county bio-organic fertilizer compost biofilter paenibacillus polymyxa paenibacillus compost soil pig manure )	2021-04-18	v4	1 / 355	approved	No
767	sheryo	High in soil with low fusarium indices compared to control treatment soil with high fusarium indices planted with Chrysanthemum in Nanjing China ( high in low fusarium cumulative disease incidence conventional tillage deep plough dazomet soil fumigation bio-organic fertilizer paenibacillus polymyxa paenibacillus compost soil pig manure compared to control high fusarium cumulative disease incidence in soil ph 6.9 chrysanthemum morifolium ramat. chrysanthemum china nanjing county )	2021-04-18	v4	1 / 360	approved	No
767	sheryo	Common in soil planted with Chrysanthemum, fertilized with bio-organic fertilizer in Nanjing China (common paenibacillus polymyxa, paenibacillus, compost, compost biofilter, pig manure, bio-organic fertilizer, soil, ph 6.9, chrysanthemum morifolium ramat., chrysanthemum, china, nanjing county)	2021-04-14	v4	1 / 866	approved	No
767	sheryo	Common in soil planted with Chrysanthemum, fertilized with bio-organic fertilizer and amended with soil fumigant 'Dazomet' in Nanjing China (common pig manure, compost soil, paenibacillus, paenibacillus polymyxa, compost biofilter, bio-organic fertilizer, nanjing county, china, chrysanthemum, chrysanthemum morifolium ramat., ph 6.9, soil, soil fumigation, dazomet)	2021-04-14	v4	1 / 875	approved	No
767	sheryo	common in soil planted with Chrysanthemum, infested with fusarium in Nanjing China (common soil, fusarium, fusarium oxysporum f. sp. chrysanthemi, ph 6.9, chrysanthemum morifolium ramat., chrysanthemum, china, nanjing county)	2021-04-14	v4	1 / 922	approved	No
767	sheryo	Common in soil planted with Chrysanthemum, amended with soil fumigant 'Dazomet' in Nanjing China (common nanjing county, china, chrysanthemum, chrysanthemum morifolium ramat., ph 6.9, soil, soil fumigation, dazomet)	2021-04-14	v4	1 / 946	approved	No
767	sheryo	common in soil planted with Chrysanthemum, fertilized with bio-organic fertilizer, amended with soil fumigant 'Dazomet' and deep plough in Nanjing China (common dazomet, soil fumigation, soil, ph 6.9, chrysanthemum morifolium ramat., chrysanthemum, china, nanjing county, bio-organic fertilizer, compost biofilter, paenibacillus polymyxa, paenibacillus, compost soil, pig manure, conventional tillage, deep plough)	2021-04-18	v4	1 / 1109	approved	No

Experiment ID: 767

Annotations for experiment: