Experiment ID: 770

Field Description
nameage and sex-associated variation in the multi-site microbiome of an entire social group of free-ranging rhesus macaques
doihttps://doi.org/10.1186/s40168-021-01009-w
sraprjna692377
mapmd50cb8386e442cd44d7a3bcd1775c9f876
datamd5132f4ec0da325f135d094f91e71c59f7

Annotations for experiment:

term enrichment score
TermScore
indian rhesus macaque0.666667
cayo santiago0.666667
age 10-15 years0.400000
age > 1 year0.400000
puerto rico0.333333
age < 1 year0.333333
macaca mulatta0.222222
penis0.222222
LOWER IN age &lt; 1 year0.181818
LOWER IN age 10-15 years0.181818
rectal swab0.153846
mouth mucosa0.153846
LOWER IN adult organism0.133333
vagina0.100000
male organism0.100000
LOWER IN penis0.100000
adult organism0.095238
LOWER IN vagina0.095238
LOWER IN infant0.090909
oral cavity0.090909
female organism0.083333
LOWER IN male organism0.083333
LOWER IN female organism0.076923
infant0.054054
feces0.005181
Fraction of dbbact annotations with this term covered by the query
TermScore
age 10-15 years0.500000
indian rhesus macaque0.500000
cayo santiago0.500000
LOWER IN age &lt; 1 year0.500000
age > 1 year0.500000
LOWER IN penis0.500000
LOWER IN age 10-15 years0.500000
age < 1 year0.333333
penis0.333333
LOWER IN vagina0.333333
puerto rico0.200000
LOWER IN male organism0.166667
LOWER IN adult organism0.166667
macaca mulatta0.125000
LOWER IN female organism0.125000
rectal swab0.100000
mouth mucosa0.100000
LOWER IN infant0.076923
vagina0.071429
male organism0.071429
adult organism0.055556
female organism0.055556
oral cavity0.052632
infant0.029412
feces0.002611
Fraction of annotations for the query sequences containing the term
TermScore
indian rhesus macaque1.000000
macaca mulatta1.000000
cayo santiago1.000000
puerto rico1.000000
age 10-15 years0.333333
adult organism0.333333
rectal swab0.333333
feces0.333333
age < 1 year0.333333
infant0.333333
age > 1 year0.333333
oral cavity0.333333
mouth mucosa0.333333
vagina0.166667
female organism0.166667
male organism0.166667
penis0.166667
LOWER IN age &lt; 1 year0.111111
LOWER IN infant0.111111
LOWER IN age 10-15 years0.111111
LOWER IN adult organism0.111111
LOWER IN male organism0.055556
LOWER IN penis0.055556
LOWER IN vagina0.055556
LOWER IN female organism0.055556
Number of experiments associating the term to the sequence
TermScore
age 10-15 years1.000000
adult organism1.000000
rectal swab1.000000
feces1.000000
indian rhesus macaque1.000000
macaca mulatta1.000000
cayo santiago1.000000
puerto rico1.000000
LOWER IN age &lt; 1 year1.000000
LOWER IN infant1.000000
age < 1 year1.000000
infant1.000000
vagina1.000000
female organism1.000000
age > 1 year1.000000
LOWER IN male organism1.000000
LOWER IN penis1.000000
LOWER IN age 10-15 years1.000000
LOWER IN adult organism1.000000
male organism1.000000
penis1.000000
LOWER IN vagina1.000000
LOWER IN female organism1.000000
oral cavity1.000000
mouth mucosa1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
770amnondominant age 10-15 years, adult organism, rectal swab, feces, indian rhesus macaque, macaca mulatta, cayo santiago, puerto rico2021-04-19v41 / 14approvedNo
770amnondominant male organism, penis, age > 1 year, indian rhesus macaque, macaca mulatta, cayo santiago, puerto rico2021-04-19v41 / 14approvedNo
770amnondominant vagina, female organism, age > 1 year, indian rhesus macaque, macaca mulatta, cayo santiago, puerto rico2021-04-19v41 / 14approvedNo
770amnondominant age < 1 year, infant, rectal swab, feces, indian rhesus macaque, macaca mulatta, cayo santiago, puerto rico2021-04-19v41 / 15approvedNo
770amnondominant age 10-15 years, adult organism, mouth mucosa, oral cavity, indian rhesus macaque, macaca mulatta, cayo santiago, puerto rico2021-04-19v41 / 18approvedNo
770amnondominant age < 1 year, infant, mouth mucosa, oral cavity, indian rhesus macaque, macaca mulatta, cayo santiago, puerto rico2021-04-19v41 / 25approvedNo
770amnon high in age < 1 year infant compared to age 10-15 years adult organism in mouth mucosa oral cavity indian rhesus macaque macaca mulatta cayo santiago puerto rico 2021-04-19v41 / 49approvedNo
770amnoncommon age < 1 year, infant, mouth mucosa, oral cavity, indian rhesus macaque, macaca mulatta, cayo santiago, puerto rico2021-04-19v41 / 59approvedNo
770amnoncommon age 10-15 years, adult organism, mouth mucosa, oral cavity, indian rhesus macaque, macaca mulatta, cayo santiago, puerto rico2021-04-19v41 / 68approvedNo
770amnon high in age 10-15 years adult organism compared to age < 1 year infant in puerto rico cayo santiago macaca mulatta indian rhesus macaque oral cavity mouth mucosa 2021-04-19v41 / 84approvedNo
770amnon high in penis male organism compared to vagina female organism in age > 1 year indian rhesus macaque macaca mulatta cayo santiago puerto rico 2021-04-19v41 / 95approvedNo
770amnoncommon male organism, penis, age > 1 year, indian rhesus macaque, macaca mulatta, cayo santiago, puerto rico2021-04-19v41 / 110approvedNo
770amnon high in age < 1 year infant compared to age 10-15 years adult organism in rectal swab feces indian rhesus macaque macaca mulatta cayo santiago puerto rico 2021-04-19v41 / 111approvedNo
770amnon high in vagina female organism compared to male organism penis in age > 1 year indian rhesus macaque macaca mulatta cayo santiago puerto rico 2021-04-19v41 / 138approvedNo
770amnoncommon vagina, female organism, age > 1 year, indian rhesus macaque, macaca mulatta, cayo santiago, puerto rico2021-04-19v41 / 169approvedNo
770amnoncommon age < 1 year, infant, rectal swab, feces, indian rhesus macaque, macaca mulatta, cayo santiago, puerto rico2021-04-19v41 / 280approvedNo
770amnon high in age 10-15 years adult organism compared to age < 1 year infant in rectal swab feces indian rhesus macaque macaca mulatta cayo santiago puerto rico 2021-04-19v41 / 304approvedNo
770amnoncommon age 10-15 years, adult organism, rectal swab, feces, indian rhesus macaque, macaca mulatta, cayo santiago, puerto rico2021-04-19v41 / 396approvedNo

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