Experiment ID: 776

Field Description
namececal microbiome profile of hawaiian feral chickens and pasture-raised broiler (commercial) chickens determined using 16s rrna amplicon sequencing
doihttps://doi.org/10.1016/j.psj.2021.101181
sraprjna644775
mapmd5c5f30b069ec422fbce7e0b0eca0ea8ab
datamd52eae5b7b9cc2589ea6c8d0c3353a65cd

Annotations for experiment:

term enrichment score
TermScore
age 5 weeks0.500000
feral0.500000
age 15-20 weeks0.500000
hawaii0.333333
broiler chicken0.250000
LOWER IN feral0.250000
LOWER IN age 15-20 weeks0.250000
LOWER IN age 5 weeks0.250000
LOWER IN broiler chicken0.222222
LOWER IN research facility0.153846
LOWER IN captive0.153846
gallus gallus0.117647
chicken0.117647
captive0.105263
LOWER IN wild0.105263
wild0.076923
caecum0.057143
research facility0.013793
Fraction of dbbact annotations with this term covered by the query
TermScore
age 5 weeks0.500000
LOWER IN feral0.500000
LOWER IN age 15-20 weeks0.500000
feral0.500000
age 15-20 weeks0.500000
LOWER IN age 5 weeks0.500000
LOWER IN broiler chicken0.333333
hawaii0.200000
broiler chicken0.166667
LOWER IN research facility0.142857
LOWER IN captive0.142857
LOWER IN wild0.076923
gallus gallus0.062500
chicken0.062500
captive0.058824
wild0.041667
caecum0.029412
research facility0.006993
Fraction of annotations for the query sequences containing the term
TermScore
caecum1.000000
gallus gallus1.000000
chicken1.000000
hawaii1.000000
broiler chicken0.500000
research facility0.500000
captive0.500000
age 5 weeks0.500000
wild0.500000
feral0.500000
age 15-20 weeks0.500000
LOWER IN wild0.166667
LOWER IN feral0.166667
LOWER IN age 15-20 weeks0.166667
LOWER IN age 5 weeks0.166667
LOWER IN research facility0.166667
LOWER IN broiler chicken0.166667
LOWER IN captive0.166667

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