Experiment ID: 776

Field Description
namececal microbiome profile of hawaiian feral chickens and pasture-raised broiler (commercial) chickens determined using 16s rrna amplicon sequencing
doihttps://doi.org/10.1016/j.psj.2021.101181
sraprjna644775
mapmd5c5f30b069ec422fbce7e0b0eca0ea8ab
datamd52eae5b7b9cc2589ea6c8d0c3353a65cd

Annotations for experiment:

term enrichment score
TermScore
age 15-20 weeks0.500000
feral0.500000
age 5 weeks0.400000
hawaii0.333333
LOWER IN age 15-20 weeks0.250000
LOWER IN feral0.250000
broiler chicken0.222222
LOWER IN age 5 weeks0.222222
LOWER IN broiler chicken0.153846
chicken0.117647
gallus gallus0.111111
captive0.100000
LOWER IN captive0.083333
wild0.076923
LOWER IN wild0.066667
caecum0.054054
research facility0.013423
LOWER IN research facility0.013072
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN age 15-20 weeks0.500000
LOWER IN feral0.500000
age 15-20 weeks0.500000
feral0.500000
age 5 weeks0.333333
LOWER IN age 5 weeks0.333333
hawaii0.200000
broiler chicken0.142857
LOWER IN broiler chicken0.142857
chicken0.062500
gallus gallus0.058824
captive0.055556
LOWER IN captive0.055556
LOWER IN wild0.041667
wild0.041667
caecum0.027778
research facility0.006803
LOWER IN research facility0.006803
Fraction of annotations for the query sequences containing the term
TermScore
caecum1.000000
gallus gallus1.000000
hawaii1.000000
chicken1.000000
research facility0.500000
captive0.500000
broiler chicken0.500000
age 5 weeks0.500000
wild0.500000
age 15-20 weeks0.500000
feral0.500000
LOWER IN wild0.166667
LOWER IN age 15-20 weeks0.166667
LOWER IN feral0.166667
LOWER IN research facility0.166667
LOWER IN captive0.166667
LOWER IN broiler chicken0.166667
LOWER IN age 5 weeks0.166667

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